Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHKBP1Q8TBC3 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.24
SHKBP1Q8TBC3 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
SHKBP1Q8TBC3 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
SHKBP1Q8TBC3 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.24
SHKBP1Q8TBC3 FANCD2P2-201ENST00000437591 1400 ntBASIC7.27□□□□□ -1.24
SHKBP1Q8TBC3 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
SHKBP1Q8TBC3 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.24
SHKBP1Q8TBC3 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.27□□□□□ -1.24
SHKBP1Q8TBC3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC132219.2-201ENST00000624416 2327 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 RNU1-5P-201ENST00000362684 144 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 Y_RNA.390-201ENST00000383932 102 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 SNORA7A-201ENST00000384765 139 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 Z68694.1-201ENST00000413929 841 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 CDC42P6-201ENST00000421246 576 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 RPS26P4-201ENST00000431743 355 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 VN1R54P-201ENST00000435210 1049 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC122718.1-201ENST00000439448 744 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 DEFA11P-201ENST00000446470 261 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AL121578.2-201ENST00000448797 447 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC099670.1-201ENST00000455141 783 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 SUMO2P2-201ENST00000456482 255 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 RN7SL393P-201ENST00000463588 296 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 FAM133DP-201ENST00000464802 691 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC126182.1-201ENST00000478134 357 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC098818.1-201ENST00000478593 252 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 DEFB109A-201ENST00000482450 265 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 OR5H5P-201ENST00000503164 928 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC114781.4-201ENST00000513707 639 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC116917.1-201ENST00000520558 305 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AL121766.1-201ENST00000547436 487 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC090695.1-201ENST00000561269 1222 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 MIR3157-201ENST00000578688 85 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC127024.5-201ENST00000580085 462 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC015802.2-201ENST00000589690 189 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC009955.2-201ENST00000597288 542 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC106791.2-201ENST00000604680 391 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AL158211.4-201ENST00000606988 584 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AL136981.2-201ENST00000617319 734 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AP005212.3-201ENST00000619964 528 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AL132796.3-201ENST00000624703 900 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC027559.1-201ENST00000636288 271 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AL596275.2-207ENST00000641188 675 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 MAPK10-323ENST00000641493 3207 ntBASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.27□□□□□ -1.25
SHKBP1Q8TBC3 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms