Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SNORA11B-201ENST00000408175 129 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 FIGN-202ENST00000409634 746 ntTSL 5 BASIC8.8□□□□□ -1
VPS8Q8N3P4 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.8□□□□□ -1
VPS8Q8N3P4 TMEM183AP1-205ENST00000432739 290 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 AL596266.1-201ENST00000448132 400 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 AC007386.1-201ENST00000455212 582 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 EIF1P7-201ENST00000487533 337 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 RN7SL547P-201ENST00000490793 290 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
VPS8Q8N3P4 RN7SKP67-201ENST00000515905 235 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC8.8□□□□□ -1
VPS8Q8N3P4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC8.8□□□□□ -1
VPS8Q8N3P4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC8.8□□□□□ -1
VPS8Q8N3P4 AC069542.2-201ENST00000624816 216 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC8.8□□□□□ -1
VPS8Q8N3P4 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC8.8□□□□□ -1
VPS8Q8N3P4 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC8.8□□□□□ -1
VPS8Q8N3P4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC8.8□□□□□ -1
VPS8Q8N3P4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
VPS8Q8N3P4 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.8□□□□□ -1
VPS8Q8N3P4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC8.8□□□□□ -1
VPS8Q8N3P4 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
VPS8Q8N3P4 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.8□□□□□ -1
VPS8Q8N3P4 KYNUP3-201ENST00000574386 1341 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 AC011933.2-201ENST00000578539 2790 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC8.8□□□□□ -1
VPS8Q8N3P4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VPS8Q8N3P4 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.8□□□□□ -1
VPS8Q8N3P4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
VPS8Q8N3P4 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.8□□□□□ -1
VPS8Q8N3P4 RPL11P3-201ENST00000395256 523 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC8.8□□□□□ -1
VPS8Q8N3P4 RPSAP35-201ENST00000413753 818 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 RPL23AP18-201ENST00000416139 468 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC8.8□□□□□ -1
VPS8Q8N3P4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC8.8□□□□□ -1
VPS8Q8N3P4 RN7SL184P-201ENST00000488308 297 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 IGKV2-18-201ENST00000522607 343 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 IGHVIII-67-4-201ENST00000524281 296 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 PMS2P3-207ENST00000529061 717 ntBASIC8.8□□□□□ -1
VPS8Q8N3P4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC8.8□□□□□ -1
VPS8Q8N3P4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC8.8□□□□□ -1
VPS8Q8N3P4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
VPS8Q8N3P4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC8.79□□□□□ -1
VPS8Q8N3P4 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
VPS8Q8N3P4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS8Q8N3P4 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS8Q8N3P4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VPS8Q8N3P4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS8Q8N3P4 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
VPS8Q8N3P4 AC093829.1-201ENST00000506662 1618 ntBASIC8.79□□□□□ -1
VPS8Q8N3P4 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.79□□□□□ -1
VPS8Q8N3P4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC8.79□□□□□ -1
VPS8Q8N3P4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
VPS8Q8N3P4 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
VPS8Q8N3P4 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
VPS8Q8N3P4 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC8.79□□□□□ -1
VPS8Q8N3P4 MIR133B-201ENST00000362210 119 ntBASIC8.79□□□□□ -1
VPS8Q8N3P4 U3.2-201ENST00000362981 210 ntBASIC8.79□□□□□ -1
VPS8Q8N3P4 RN7SKP160-201ENST00000363804 340 ntBASIC8.79□□□□□ -1
VPS8Q8N3P4 U3.10-201ENST00000364459 214 ntBASIC8.79□□□□□ -1
VPS8Q8N3P4 CYP2AC1P-201ENST00000407830 1173 ntBASIC8.79□□□□□ -1
VPS8Q8N3P4 AC096921.1-201ENST00000411661 375 ntBASIC8.79□□□□□ -1
VPS8Q8N3P4 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.79□□□□□ -1
VPS8Q8N3P4 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC8.79□□□□□ -1
VPS8Q8N3P4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC8.79□□□□□ -1
VPS8Q8N3P4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC8.79□□□□□ -1
VPS8Q8N3P4 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS8Q8N3P4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.79□□□□□ -1
VPS8Q8N3P4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC8.79□□□□□ -1
VPS8Q8N3P4 AC125612.1-201ENST00000547580 377 ntBASIC8.79□□□□□ -1
VPS8Q8N3P4 AC015720.2-201ENST00000567709 334 ntBASIC8.79□□□□□ -1
VPS8Q8N3P4 MIR4489-201ENST00000578869 62 ntBASIC8.79□□□□□ -1
VPS8Q8N3P4 AC007448.1-201ENST00000582714 234 ntBASIC8.79□□□□□ -1
VPS8Q8N3P4 GMFG-212ENST00000602185 423 ntTSL 3 BASIC8.79□□□□□ -1
VPS8Q8N3P4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC8.79□□□□□ -1
VPS8Q8N3P4 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VPS8Q8N3P4 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS8Q8N3P4 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
VPS8Q8N3P4 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC8.79□□□□□ -1
VPS8Q8N3P4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC8.79□□□□□ -1
VPS8Q8N3P4 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
VPS8Q8N3P4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC8.78□□□□□ -1
VPS8Q8N3P4 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC8.78□□□□□ -1
VPS8Q8N3P4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
VPS8Q8N3P4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC8.78□□□□□ -1
VPS8Q8N3P4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC8.78□□□□□ -1
VPS8Q8N3P4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC8.78□□□□□ -1
VPS8Q8N3P4 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.78□□□□□ -1
VPS8Q8N3P4 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
VPS8Q8N3P4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.78□□□□□ -1
VPS8Q8N3P4 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC8.78□□□□□ -1
VPS8Q8N3P4 ATP5LP5-201ENST00000483050 299 ntBASIC8.78□□□□□ -1
VPS8Q8N3P4 AC027026.1-201ENST00000532323 742 ntBASIC8.78□□□□□ -1
VPS8Q8N3P4 AC007225.2-201ENST00000562529 256 ntBASIC8.78□□□□□ -1
VPS8Q8N3P4 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC8.78□□□□□ -1
VPS8Q8N3P4 SUGT1P3-202ENST00000604259 383 ntBASIC8.78□□□□□ -1
VPS8Q8N3P4 AL353729.2-201ENST00000605859 1249 ntBASIC8.78□□□□□ -1
VPS8Q8N3P4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
VPS8Q8N3P4 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms