Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 PARP4P2-201ENST00000446672 3326 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AL512283.1-201ENST00000606756 1384 ntBASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.63□□□□□ -1.51
CLIP4Q8N3C7 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AL355488.2-201ENST00000609909 2850 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AL096800.1-201ENST00000405326 893 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 SNORA77.2-201ENST00000408571 112 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 RNU6-564P-201ENST00000410983 104 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AC007064.3-201ENST00000422608 359 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 VN1R20P-201ENST00000425215 966 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 RPL23AP60-201ENST00000450011 454 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AC099670.1-201ENST00000455141 783 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 RPS7P10-201ENST00000464254 603 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 SEPT7P6-201ENST00000469999 1143 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 HMGN1P16-201ENST00000508308 283 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 NACAP5-201ENST00000509863 636 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AC036111.2-201ENST00000533247 901 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 LINC00557-201ENST00000563184 1279 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AC093524.1-201ENST00000564266 1094 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 WBP1LP12-201ENST00000604449 331 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 RPSAP75-201ENST00000605848 301 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 AC007603.3-201ENST00000636915 979 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 LINC01613-201ENST00000561476 2780 ntBASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLIP4Q8N3C7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AL607077.1-201ENST00000401718 499 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 RN7SKP144-201ENST00000411108 279 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AL354692.1-201ENST00000423044 315 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AL592494.2-201ENST00000425455 1548 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 IGLV3-4-201ENST00000432300 244 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 LINC00328-2P-201ENST00000436585 219 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AL645936.1-201ENST00000441979 518 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms