Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SKA3Q8IX90 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.27□□□□□ -1.57
SKA3Q8IX90 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SKA3Q8IX90 GNL2P1-201ENST00000451274 2190 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SKA3Q8IX90 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SKA3Q8IX90 COX6B1P3-201ENST00000312310 260 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SKA3Q8IX90 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 RNA5SP187-201ENST00000384400 119 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SKA3Q8IX90 MYL6P5-201ENST00000412707 459 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 NMD3P2-201ENST00000421815 761 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 ATP5LP2-201ENST00000440646 311 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 CUBNP2-201ENST00000443534 1139 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 AL445466.1-201ENST00000448432 357 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 AC023194.2-201ENST00000465398 406 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 RN7SL170P-201ENST00000487098 295 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 LDHAP1-201ENST00000509421 992 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 RN7SKP238-201ENST00000516483 249 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 EIF4EP5-201ENST00000528228 640 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 AC096708.4-201ENST00000620563 552 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 AC073593.1-201ENST00000624500 411 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 LYARP1-201ENST00000436977 1501 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 AC099654.3-201ENST00000447087 1546 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SKA3Q8IX90 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SKA3Q8IX90 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SKA3Q8IX90 AC022164.1-201ENST00000568767 2673 ntBASIC5.26□□□□□ -1.57
SKA3Q8IX90 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SKA3Q8IX90 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SKA3Q8IX90 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 RBPJP7-201ENST00000442803 1447 ntBASIC5.25□□□□□ -1.57
SKA3Q8IX90 RBPJP5-201ENST00000449433 1447 ntBASIC5.25□□□□□ -1.57
SKA3Q8IX90 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AC107977.1-201ENST00000355745 939 ntBASIC5.25□□□□□ -1.57
SKA3Q8IX90 AL121878.1-201ENST00000418638 859 ntBASIC5.25□□□□□ -1.57
SKA3Q8IX90 RPL24P2-201ENST00000421023 475 ntBASIC5.25□□□□□ -1.57
SKA3Q8IX90 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 HMGN2P27-201ENST00000427352 270 ntBASIC5.25□□□□□ -1.57
SKA3Q8IX90 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SKA3Q8IX90 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 RN7SL72P-201ENST00000460697 269 ntBASIC5.25□□□□□ -1.57
SKA3Q8IX90 AC068228.1-201ENST00000461723 211 ntBASIC5.25□□□□□ -1.57
SKA3Q8IX90 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 RPL37P23-201ENST00000492641 294 ntBASIC5.25□□□□□ -1.57
SKA3Q8IX90 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 PRMT5P1-201ENST00000514351 598 ntBASIC5.25□□□□□ -1.57
SKA3Q8IX90 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SKA3Q8IX90 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AC008507.3-201ENST00000585753 472 ntBASIC5.25□□□□□ -1.57
SKA3Q8IX90 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AL136228.1-201ENST00000622221 319 ntBASIC5.25□□□□□ -1.57
SKA3Q8IX90 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AL022311.1-201ENST00000623726 19416 ntBASIC5.25□□□□□ -1.57
SKA3Q8IX90 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AC114876.1-201ENST00000490962 1366 ntBASIC5.25□□□□□ -1.57
SKA3Q8IX90 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SKA3Q8IX90 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SKA3Q8IX90 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SKA3Q8IX90 AL449283.1-201ENST00000602631 3403 ntBASIC5.25□□□□□ -1.57
SKA3Q8IX90 THAP12P9-201ENST00000503971 2360 ntBASIC5.24□□□□□ -1.57
SKA3Q8IX90 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.24□□□□□ -1.57
SKA3Q8IX90 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms