Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
RNF43Q68DV7 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
RNF43Q68DV7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC7.37□□□□□ -1.23
RNF43Q68DV7 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
RNF43Q68DV7 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.37□□□□□ -1.23
RNF43Q68DV7 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RNF43Q68DV7 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC061975.5-201ENST00000584928 1441 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC005034.3-201ENST00000604845 1747 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 PABPC1P8-201ENST00000452851 2086 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 Y_RNA.41-201ENST00000362646 102 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 Y_RNA.62-201ENST00000362840 99 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 RNU6-481P-201ENST00000384194 107 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 Y_RNA.472-201ENST00000384322 102 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 ATP5F1P3-201ENST00000397213 657 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 CXADRP1-201ENST00000398098 1095 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 CYP4F32P-201ENST00000426492 504 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 PUDPP2-201ENST00000431423 643 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 MYO5BP3-201ENST00000431872 1279 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 AL365220.1-201ENST00000432923 399 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 RPL12P11-201ENST00000439970 501 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 PGBD4P1-201ENST00000473644 407 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 RN7SL868P-201ENST00000485915 303 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 TPT1P3-201ENST00000492841 512 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC138853.1-201ENST00000503549 823 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC008967.1-201ENST00000504843 163 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 PCNAP1-201ENST00000505363 709 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 MTCO1P31-201ENST00000506355 492 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC027801.3-201ENST00000515049 698 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC067904.2-201ENST00000517322 1283 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC016957.1-201ENST00000534895 309 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC023310.2-201ENST00000553844 547 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 AC006566.1-201ENST00000608943 513 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 FRG1DP-201ENST00000635586 771 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF43Q68DV7 MAPK10-344ENST00000641718 3746 ntBASIC7.36□□□□□ -1.23
RNF43Q68DV7 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF43Q68DV7 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.35□□□□□ -1.23
RNF43Q68DV7 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF43Q68DV7 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF43Q68DV7 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF43Q68DV7 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF43Q68DV7 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF43Q68DV7 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF43Q68DV7 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF43Q68DV7 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF43Q68DV7 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF43Q68DV7 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RNF43Q68DV7 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF43Q68DV7 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF43Q68DV7 Y_RNA.408-201ENST00000383987 102 ntBASIC7.35□□□□□ -1.23
RNF43Q68DV7 MIR187-201ENST00000385062 109 ntBASIC7.35□□□□□ -1.23
RNF43Q68DV7 VN1R12P-201ENST00000403778 876 ntBASIC7.35□□□□□ -1.23
RNF43Q68DV7 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF43Q68DV7 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.35□□□□□ -1.23
RNF43Q68DV7 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF43Q68DV7 VN1R42P-201ENST00000424651 344 ntBASIC7.35□□□□□ -1.23
RNF43Q68DV7 CENPIP1-201ENST00000425713 902 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 997.6 ms