Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 CASC19-221ENST00000641309 1382 ntBASIC5.63□□□□□ -1.51
RIF1Q5UIP0 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AC006335.2-201ENST00000437993 330 ntBASIC5.63□□□□□ -1.51
RIF1Q5UIP0 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AC011447.4-201ENST00000587562 111 ntBASIC5.63□□□□□ -1.51
RIF1Q5UIP0 BNIP3P33-201ENST00000598912 569 ntBASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AC068790.7-201ENST00000602347 528 ntBASIC5.63□□□□□ -1.51
RIF1Q5UIP0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 GRIK2-202ENST00000358361 1981 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AC004975.1-201ENST00000428733 208 ntBASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 FRG2FP-204ENST00000453982 852 ntBASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 NMNAT1P5-201ENST00000559657 841 ntBASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 AL162431.4-201ENST00000604674 411 ntBASIC5.63□□□□□ -1.51
RIF1Q5UIP0 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 OR11H13P-201ENST00000359695 979 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 SNORA16A-201ENST00000384342 137 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 OR5W1P-201ENST00000423705 938 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 RN7SL51P-201ENST00000468230 285 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 AC078878.1-201ENST00000539832 958 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 SS18L2P2-201ENST00000583960 235 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 IMMTP1-201ENST00000435590 2219 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 CASC19-281ENST00000642118 1554 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 RNA5SP123-201ENST00000363244 119 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 RNU4ATAC2P-201ENST00000408674 126 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 AC092570.3-201ENST00000420113 693 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 BX119917.1-201ENST00000432517 502 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 RPL21P129-201ENST00000491732 478 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 RN7SL591P-201ENST00000496150 292 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 AC008629.2-201ENST00000503783 483 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms