Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
SHROOM1Q2M3G4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.81□□□□□ -1.32
SHROOM1Q2M3G4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
SHROOM1Q2M3G4 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AC116158.1-201ENST00000560231 2129 ntBASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 RNA5SP234-201ENST00000363916 119 ntBASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 MYL6P5-201ENST00000412707 459 ntBASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 NPM1P4-201ENST00000414095 812 ntBASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AL603882.1-201ENST00000463059 681 ntBASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 SIAH1P1-201ENST00000479411 923 ntBASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AC017007.3-201ENST00000479865 435 ntBASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 RNA5SP116-201ENST00000516132 98 ntBASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AC244502.2-201ENST00000543361 851 ntBASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AC096996.1-201ENST00000563813 325 ntBASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AC063977.5-201ENST00000601044 974 ntBASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AP001885.1-201ENST00000621658 558 ntBASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AC004836.1-201ENST00000623032 634 ntBASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 AC005725.1-201ENST00000577346 2607 ntBASIC6.8□□□□□ -1.32
SHROOM1Q2M3G4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 AC130304.1-201ENST00000622942 2385 ntBASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 SNORD8-201ENST00000363915 110 ntBASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 RN7SKP59-201ENST00000410520 314 ntBASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 RMRPP5-201ENST00000411156 267 ntBASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 AC116036.1-201ENST00000412199 367 ntBASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 TNPO1P1-201ENST00000423641 1138 ntBASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 AC079922.1-201ENST00000443291 359 ntBASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 AC021678.3-201ENST00000517893 476 ntBASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 MIR1269B-201ENST00000580405 75 ntBASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHROOM1Q2M3G4 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 AC079753.1-201ENST00000623243 3868 ntBASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 AC010168.2-201ENST00000562691 5428 ntBASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 MIR143-201ENST00000385300 106 ntBASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 OR2AT2P-201ENST00000413438 905 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms