Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 RNU105B-201ENST00000364478 208 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 RPL11P3-201ENST00000395256 523 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AL096829.1-201ENST00000413677 457 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 METTL15P3-201ENST00000415522 1221 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 RPL35AP31-201ENST00000418340 337 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 RPL12P12-201ENST00000424633 501 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AC073072.2-201ENST00000447425 348 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AC016027.4-201ENST00000450866 277 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AC005165.2-201ENST00000466070 380 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AC091544.1-201ENST00000484702 348 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 OR11I1P-201ENST00000486033 954 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 RPL12P30-201ENST00000488389 499 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 RPS27P20-201ENST00000492051 246 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 EIF3LP3-201ENST00000495197 822 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AC023424.1-201ENST00000496058 459 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AC007346.2-201ENST00000564816 892 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 CCDC58P1-201ENST00000578567 430 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AP005136.2-201ENST00000583253 1049 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AC092681.3-201ENST00000609463 678 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AL122125.1-201ENST00000616999 600 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AC010325.3-201ENST00000641084 394 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AC083899.1-201ENST00000454465 3819 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 AC018717.1-201ENST00000457712 1505 ntBASIC4.51□□□□□ -1.69
HIST1H1AQ02539 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
HIST1H1AQ02539 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 TCP1P3-201ENST00000414406 1498 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AL133260.1-201ENST00000405720 405 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 SNRPEP6-201ENST00000407465 277 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AL139805.1-201ENST00000407837 289 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 NMD3P2-201ENST00000421815 761 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AC113412.1-201ENST00000425840 504 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 LINC00328-2P-201ENST00000436585 219 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AC096632.2-201ENST00000438139 1239 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 RPL12P49-201ENST00000441100 121 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AL512593.1-201ENST00000444758 779 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 ZNF619P1-201ENST00000446539 752 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 RSU1P1-201ENST00000453416 441 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 RN7SL836P-201ENST00000476140 296 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 PDCL3P4-201ENST00000489621 720 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 SNRPCP11-201ENST00000492453 205 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AC108103.1-201ENST00000511286 446 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 COX6CP7-201ENST00000597056 208 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AC008833.1-201ENST00000611633 691 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AC012676.3-201ENST00000614983 479 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 AC005618.4-201ENST00000625053 554 ntBASIC4.5□□□□□ -1.69
HIST1H1AQ02539 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 LYARP1-201ENST00000436977 1501 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms