Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
LMO4P61968 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.86□□□□□ -1.63
LMO4P61968 AL589826.1-201ENST00000340697 249 ntBASIC4.86□□□□□ -1.63
LMO4P61968 SNORA64.1-201ENST00000362600 132 ntBASIC4.86□□□□□ -1.63
LMO4P61968 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
LMO4P61968 AP003170.5-201ENST00000397185 335 ntBASIC4.86□□□□□ -1.63
LMO4P61968 AC116036.1-201ENST00000412199 367 ntBASIC4.86□□□□□ -1.63
LMO4P61968 TMA16P2-201ENST00000413187 601 ntBASIC4.86□□□□□ -1.63
LMO4P61968 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.86□□□□□ -1.63
LMO4P61968 BMS1P17-202ENST00000416720 316 ntBASIC4.86□□□□□ -1.63
LMO4P61968 AL662874.1-201ENST00000426065 230 ntBASIC4.86□□□□□ -1.63
LMO4P61968 DEFA9P-201ENST00000433042 285 ntBASIC4.86□□□□□ -1.63
LMO4P61968 HMGB3P24-201ENST00000433260 622 ntBASIC4.86□□□□□ -1.63
LMO4P61968 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.86□□□□□ -1.63
LMO4P61968 UBE2V2P1-201ENST00000434717 398 ntBASIC4.86□□□□□ -1.63
LMO4P61968 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.86□□□□□ -1.63
LMO4P61968 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.86□□□□□ -1.63
LMO4P61968 AL663074.2-201ENST00000440621 479 ntBASIC4.86□□□□□ -1.63
LMO4P61968 CUBNP2-201ENST00000443534 1139 ntBASIC4.86□□□□□ -1.63
LMO4P61968 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.86□□□□□ -1.63
LMO4P61968 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.86□□□□□ -1.63
LMO4P61968 AL162739.1-201ENST00000450606 307 ntBASIC4.86□□□□□ -1.63
LMO4P61968 TAAR4P-201ENST00000454843 1039 ntBASIC4.86□□□□□ -1.63
LMO4P61968 RPS23P6-201ENST00000466136 431 ntBASIC4.86□□□□□ -1.63
LMO4P61968 AC092905.1-201ENST00000467527 949 ntBASIC4.86□□□□□ -1.63
LMO4P61968 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 AC074087.1-201ENST00000512059 724 ntBASIC4.86□□□□□ -1.63
LMO4P61968 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.86□□□□□ -1.63
LMO4P61968 AC090651.1-201ENST00000567865 634 ntBASIC4.86□□□□□ -1.63
LMO4P61968 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.86□□□□□ -1.63
LMO4P61968 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.86□□□□□ -1.63
LMO4P61968 MIR3176-201ENST00000582210 90 ntBASIC4.86□□□□□ -1.63
LMO4P61968 MIR4505-201ENST00000582238 73 ntBASIC4.86□□□□□ -1.63
LMO4P61968 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.86□□□□□ -1.63
LMO4P61968 FO393422.1-201ENST00000603908 708 ntBASIC4.86□□□□□ -1.63
LMO4P61968 AL589674.2-201ENST00000604304 337 ntBASIC4.86□□□□□ -1.63
LMO4P61968 AC004890.3-201ENST00000605566 1095 ntBASIC4.86□□□□□ -1.63
LMO4P61968 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.86□□□□□ -1.63
LMO4P61968 AL137246.2-201ENST00000613439 662 ntBASIC4.86□□□□□ -1.63
LMO4P61968 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.86□□□□□ -1.63
LMO4P61968 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.86□□□□□ -1.63
LMO4P61968 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
LMO4P61968 TEK-202ENST00000406359 3935 ntTSL 2 BASIC4.86□□□□□ -1.63
LMO4P61968 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC4.86□□□□□ -1.63
LMO4P61968 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LMO4P61968 AL355377.1-201ENST00000621125 1653 ntBASIC4.86□□□□□ -1.63
LMO4P61968 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.86□□□□□ -1.63
LMO4P61968 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LMO4P61968 BRD7P6-201ENST00000431406 1860 ntBASIC4.86□□□□□ -1.63
LMO4P61968 AC009779.8-201ENST00000641684 4384 ntBASIC4.86□□□□□ -1.63
LMO4P61968 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMO4P61968 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.85□□□□□ -1.63
LMO4P61968 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMO4P61968 AC079753.1-201ENST00000623243 3868 ntBASIC4.85□□□□□ -1.63
LMO4P61968 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMO4P61968 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LMO4P61968 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LMO4P61968 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMO4P61968 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.85□□□□□ -1.63
LMO4P61968 Z68694.1-201ENST00000413929 841 ntBASIC4.85□□□□□ -1.63
LMO4P61968 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LMO4P61968 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC4.85□□□□□ -1.63
LMO4P61968 MTND2P15-201ENST00000418575 892 ntBASIC4.85□□□□□ -1.63
LMO4P61968 RPS17P17-201ENST00000419392 409 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.85□□□□□ -1.63
LMO4P61968 NME1P1-201ENST00000420914 382 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AC016027.5-201ENST00000427227 210 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.85□□□□□ -1.63
LMO4P61968 AL731534.1-201ENST00000434711 269 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AC097523.2-201ENST00000435551 652 ntBASIC4.85□□□□□ -1.63
LMO4P61968 Z84478.1-201ENST00000438230 1219 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AC023141.8-201ENST00000442554 208 ntBASIC4.85□□□□□ -1.63
LMO4P61968 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.85□□□□□ -1.63
LMO4P61968 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.85□□□□□ -1.63
LMO4P61968 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.85□□□□□ -1.63
LMO4P61968 AC089999.1-201ENST00000460336 374 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AL157777.1-201ENST00000468100 304 ntBASIC4.85□□□□□ -1.63
LMO4P61968 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.85□□□□□ -1.63
LMO4P61968 PFN1P6-201ENST00000476786 399 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.85□□□□□ -1.63
LMO4P61968 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.85□□□□□ -1.63
LMO4P61968 AL133372.1-201ENST00000493565 745 ntBASIC4.85□□□□□ -1.63
LMO4P61968 RN7SL284P-201ENST00000498823 275 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AC008945.1-201ENST00000505144 499 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AC138866.2-201ENST00000508650 584 ntBASIC4.85□□□□□ -1.63
LMO4P61968 SNORA43.3-201ENST00000517240 103 ntBASIC4.85□□□□□ -1.63
LMO4P61968 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.85□□□□□ -1.63
LMO4P61968 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LMO4P61968 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.85□□□□□ -1.63
LMO4P61968 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC4.85□□□□□ -1.63
LMO4P61968 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.85□□□□□ -1.63
LMO4P61968 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.85□□□□□ -1.63
LMO4P61968 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms