Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
RHBDL3P58872 SNORA51.1-201ENST00000363243 140 ntBASIC7.18□□□□□ -1.26
RHBDL3P58872 PTCD2P2-201ENST00000415579 1095 ntBASIC7.18□□□□□ -1.26
RHBDL3P58872 AC242426.1-201ENST00000435270 960 ntBASIC7.18□□□□□ -1.26
RHBDL3P58872 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.18□□□□□ -1.26
RHBDL3P58872 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RHBDL3P58872 VN1R48P-201ENST00000448149 1036 ntBASIC7.18□□□□□ -1.26
RHBDL3P58872 AL157884.3-201ENST00000448273 1184 ntBASIC7.18□□□□□ -1.26
RHBDL3P58872 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.18□□□□□ -1.26
RHBDL3P58872 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.18□□□□□ -1.26
RHBDL3P58872 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.18□□□□□ -1.26
RHBDL3P58872 OR56A7P-201ENST00000524865 941 ntBASIC7.18□□□□□ -1.26
RHBDL3P58872 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC7.18□□□□□ -1.26
RHBDL3P58872 AC015802.5-201ENST00000607478 399 ntBASIC7.18□□□□□ -1.26
RHBDL3P58872 AC007620.3-201ENST00000608131 497 ntBASIC7.18□□□□□ -1.26
RHBDL3P58872 AL021918.2-201ENST00000613415 194 ntBASIC7.18□□□□□ -1.26
RHBDL3P58872 AC015660.5-201ENST00000623238 564 ntBASIC7.18□□□□□ -1.26
RHBDL3P58872 OR8G3P-202ENST00000641572 1255 ntBASIC7.18□□□□□ -1.26
RHBDL3P58872 AC112243.1-201ENST00000623949 3851 ntBASIC7.18□□□□□ -1.26
RHBDL3P58872 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.18□□□□□ -1.26
RHBDL3P58872 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.18□□□□□ -1.26
RHBDL3P58872 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
RHBDL3P58872 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RHBDL3P58872 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RHBDL3P58872 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RHBDL3P58872 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RHBDL3P58872 FUNDC2P3-201ENST00000334716 533 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RHBDL3P58872 RN7SKP128-201ENST00000364270 303 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
RHBDL3P58872 RNU6-729P-201ENST00000384399 107 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 OR7E101P-201ENST00000400428 513 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 RPL7P58-201ENST00000402913 758 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.17□□□□□ -1.26
RHBDL3P58872 AC079355.1-201ENST00000421770 223 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 HMGB3P10-201ENST00000434734 572 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 AC046176.1-201ENST00000435260 1170 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 TUBB4BP6-201ENST00000437576 479 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 Z84478.1-201ENST00000438230 1219 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 RPL23AP60-201ENST00000450011 454 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 AL445665.1-202ENST00000452436 324 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 RPS27AP2-201ENST00000457576 465 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC7.17□□□□□ -1.26
RHBDL3P58872 HMGB1P47-201ENST00000511281 589 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 ACTR6P1-201ENST00000514311 1104 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.17□□□□□ -1.26
RHBDL3P58872 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC7.17□□□□□ -1.26
RHBDL3P58872 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.17□□□□□ -1.26
RHBDL3P58872 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.17□□□□□ -1.26
RHBDL3P58872 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.17□□□□□ -1.26
RHBDL3P58872 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.17□□□□□ -1.26
RHBDL3P58872 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.17□□□□□ -1.26
RHBDL3P58872 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.17□□□□□ -1.26
RHBDL3P58872 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RHBDL3P58872 AL356608.1-201ENST00000610034 820 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 AP000894.4-201ENST00000610185 483 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.17□□□□□ -1.26
RHBDL3P58872 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.17□□□□□ -1.26
RHBDL3P58872 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.17□□□□□ -1.26
RHBDL3P58872 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RHBDL3P58872 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.17□□□□□ -1.26
RHBDL3P58872 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RHBDL3P58872 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
RHBDL3P58872 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
RHBDL3P58872 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RHBDL3P58872 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
RHBDL3P58872 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RHBDL3P58872 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RHBDL3P58872 AL031651.1-201ENST00000615357 1438 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RHBDL3P58872 AC022819.1-201ENST00000563495 3910 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RHBDL3P58872 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.17□□□□□ -1.26
RHBDL3P58872 AL161912.4-201ENST00000623889 2468 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
RHBDL3P58872 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RHBDL3P58872 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RHBDL3P58872 MTCO1P7-201ENST00000419523 1542 ntBASIC7.17□□□□□ -1.26
RHBDL3P58872 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.16□□□□□ -1.26
RHBDL3P58872 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
RHBDL3P58872 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
RHBDL3P58872 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.16□□□□□ -1.26
RHBDL3P58872 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC7.16□□□□□ -1.26
RHBDL3P58872 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RHBDL3P58872 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC7.16□□□□□ -1.26
RHBDL3P58872 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RHBDL3P58872 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RHBDL3P58872 SNORA27.3-201ENST00000364937 134 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RHBDL3P58872 RNU6-1263P-201ENST00000384601 106 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RHBDL3P58872 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RHBDL3P58872 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
RHBDL3P58872 SNRPEP6-201ENST00000407465 277 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 AC093155.2-201ENST00000420734 937 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 MTND4LP13-201ENST00000425022 298 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.16□□□□□ -1.26
RHBDL3P58872 AC112187.1-201ENST00000455837 479 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 EIF2S2P4-201ENST00000461070 984 ntBASIC7.16□□□□□ -1.26
RHBDL3P58872 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms