Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH12P55289 GCNT6-201ENST00000379591 934 ntBASIC5.61□□□□□ -1.51
CDH12P55289 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH12P55289 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH12P55289 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
CDH12P55289 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH12P55289 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH12P55289 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH12P55289 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH12P55289 ARMC4P1-201ENST00000438905 707 ntBASIC5.61□□□□□ -1.51
CDH12P55289 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDH12P55289 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.61□□□□□ -1.51
CDH12P55289 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH12P55289 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH12P55289 OSTCP1-201ENST00000455507 450 ntBASIC5.61□□□□□ -1.51
CDH12P55289 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH12P55289 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 PCNAP1-201ENST00000505363 709 ntBASIC5.61□□□□□ -1.51
CDH12P55289 ST13P12-201ENST00000508958 1094 ntBASIC5.61□□□□□ -1.51
CDH12P55289 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 AC108157.1-201ENST00000510511 539 ntBASIC5.61□□□□□ -1.51
CDH12P55289 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.61□□□□□ -1.51
CDH12P55289 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH12P55289 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH12P55289 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH12P55289 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH12P55289 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH12P55289 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH12P55289 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CDH12P55289 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH12P55289 AC015911.5-201ENST00000587076 451 ntBASIC5.61□□□□□ -1.51
CDH12P55289 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH12P55289 AC110792.3-201ENST00000595906 1614 ntBASIC5.61□□□□□ -1.51
CDH12P55289 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH12P55289 AC008555.7-201ENST00000605008 583 ntBASIC5.61□□□□□ -1.51
CDH12P55289 AC022001.1-201ENST00000605193 268 ntBASIC5.61□□□□□ -1.51
CDH12P55289 AC026979.4-201ENST00000606555 645 ntBASIC5.61□□□□□ -1.51
CDH12P55289 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 AC138907.8-201ENST00000623981 2256 ntBASIC5.61□□□□□ -1.51
CDH12P55289 AP003499.2-201ENST00000624100 483 ntBASIC5.61□□□□□ -1.51
CDH12P55289 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH12P55289 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CDH12P55289 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH12P55289 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH12P55289 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH12P55289 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH12P55289 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH12P55289 AC005224.3-201ENST00000584683 2140 ntBASIC5.6□□□□□ -1.51
CDH12P55289 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CDH12P55289 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH12P55289 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
CDH12P55289 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH12P55289 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CDH12P55289 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 RNU6-697P-201ENST00000363348 107 ntBASIC5.6□□□□□ -1.51
CDH12P55289 SNORA64.3-201ENST00000365647 134 ntBASIC5.6□□□□□ -1.51
CDH12P55289 RNU6-925P-201ENST00000384629 104 ntBASIC5.6□□□□□ -1.51
CDH12P55289 RNU11-201ENST00000387069 134 ntBASIC5.6□□□□□ -1.51
CDH12P55289 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CDH12P55289 PRELID1P1-201ENST00000403549 660 ntBASIC5.6□□□□□ -1.51
CDH12P55289 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH12P55289 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH12P55289 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH12P55289 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH12P55289 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH12P55289 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH12P55289 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CDH12P55289 KRT8P51-201ENST00000438938 274 ntBASIC5.6□□□□□ -1.51
CDH12P55289 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH12P55289 CUBNP2-201ENST00000443534 1139 ntBASIC5.6□□□□□ -1.51
CDH12P55289 RPL5P10-201ENST00000445207 894 ntBASIC5.6□□□□□ -1.51
CDH12P55289 AC234771.2-201ENST00000445718 597 ntBASIC5.6□□□□□ -1.51
CDH12P55289 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH12P55289 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH12P55289 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH12P55289 RPL23AP40-201ENST00000487630 390 ntBASIC5.6□□□□□ -1.51
CDH12P55289 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CDH12P55289 CCDC11P1-201ENST00000503137 1162 ntBASIC5.6□□□□□ -1.51
CDH12P55289 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH12P55289 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms