Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.43□□□□□ -1.38
CLCN3P51790 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CLCN3P51790 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CLCN3P51790 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CLCN3P51790 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLCN3P51790 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CLCN3P51790 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.43□□□□□ -1.38
CLCN3P51790 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.43□□□□□ -1.38
CLCN3P51790 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLCN3P51790 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLCN3P51790 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.42□□□□□ -1.38
CLCN3P51790 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN3P51790 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN3P51790 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CLCN3P51790 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN3P51790 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN3P51790 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN3P51790 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN3P51790 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.42□□□□□ -1.38
CLCN3P51790 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.42□□□□□ -1.38
CLCN3P51790 RNA5SP46-201ENST00000362370 120 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 RN7SKP293-201ENST00000411389 296 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.42□□□□□ -1.38
CLCN3P51790 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 AC244453.4-201ENST00000419150 388 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.42□□□□□ -1.38
CLCN3P51790 TRGV7-201ENST00000427089 353 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.42□□□□□ -1.38
CLCN3P51790 AC013410.1-201ENST00000436223 1232 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 GAPDHP48-201ENST00000436626 961 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.42□□□□□ -1.38
CLCN3P51790 MRE11P1-201ENST00000464884 2127 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 AC009120.1-201ENST00000493458 473 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.42□□□□□ -1.38
CLCN3P51790 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.42□□□□□ -1.38
CLCN3P51790 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.42□□□□□ -1.38
CLCN3P51790 AC074087.1-201ENST00000512059 724 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.42□□□□□ -1.38
CLCN3P51790 RPL7L1P4-201ENST00000513004 707 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.42□□□□□ -1.38
CLCN3P51790 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.42□□□□□ -1.38
CLCN3P51790 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.42□□□□□ -1.38
CLCN3P51790 AC244502.2-201ENST00000543361 851 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.42□□□□□ -1.38
CLCN3P51790 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.42□□□□□ -1.38
CLCN3P51790 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.42□□□□□ -1.38
CLCN3P51790 AC104695.2-201ENST00000605056 775 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.42□□□□□ -1.38
CLCN3P51790 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.42□□□□□ -1.38
CLCN3P51790 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CLCN3P51790 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.42□□□□□ -1.38
CLCN3P51790 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN3P51790 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.42□□□□□ -1.38
CLCN3P51790 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.42□□□□□ -1.38
CLCN3P51790 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
CLCN3P51790 AP002833.3-201ENST00000625075 2265 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CLCN3P51790 AC005725.1-201ENST00000577346 2607 ntBASIC6.42□□□□□ -1.38
CLCN3P51790 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.42□□□□□ -1.38
CLCN3P51790 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN3P51790 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN3P51790 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.41□□□□□ -1.38
CLCN3P51790 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN3P51790 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN3P51790 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.41□□□□□ -1.38
CLCN3P51790 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CLCN3P51790 IMMTP1-201ENST00000435590 2219 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
CLCN3P51790 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN3P51790 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN3P51790 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.41□□□□□ -1.38
CLCN3P51790 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN3P51790 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.41□□□□□ -1.38
CLCN3P51790 OR2AT2P-201ENST00000413438 905 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.41□□□□□ -1.38
CLCN3P51790 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.41□□□□□ -1.38
CLCN3P51790 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CLCN3P51790 NPM1P48-201ENST00000436002 853 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 LRRC37A14P-201ENST00000452297 462 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 OR7E157P-201ENST00000494376 911 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 AL136038.1-201ENST00000497246 351 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN3P51790 RNU6-615P-201ENST00000516065 106 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 RNA5SP116-201ENST00000516132 98 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 SNORA48.9-201ENST00000516419 162 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 SCARNA21.2-201ENST00000516600 166 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 SNORA81.2-201ENST00000516868 170 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 AC139365.2-201ENST00000517972 253 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.41□□□□□ -1.38
CLCN3P51790 MIR4505-201ENST00000582238 73 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 MIR4260-201ENST00000583107 67 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.41□□□□□ -1.38
CLCN3P51790 AL512624.1-201ENST00000613638 469 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.41□□□□□ -1.38
CLCN3P51790 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN3P51790 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.41□□□□□ -1.38
CLCN3P51790 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CLCN3P51790 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 1321.5 ms