Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
BRCA2P51587 RNA5SP455-201ENST00000365190 119 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 AC068287.1-201ENST00000430283 295 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.99□□□□□ -1.45
BRCA2P51587 EIF3KP3-201ENST00000514461 639 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 MIR4444-1-201ENST00000581696 74 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 MIR4444-2-201ENST00000584390 74 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRCA2P51587 BX284613.1-201ENST00000452221 1641 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.99□□□□□ -1.45
BRCA2P51587 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BRCA2P51587 AC112498.1-201ENST00000444401 332 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 PPM1AP1-201ENST00000502740 1135 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.99□□□□□ -1.45
BRCA2P51587 AP001781.1-201ENST00000530977 207 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.99□□□□□ -1.45
BRCA2P51587 AP000769.2-201ENST00000602344 396 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 AC067931.1-201ENST00000624190 671 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.99□□□□□ -1.45
BRCA2P51587 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BRCA2P51587 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.99□□□□□ -1.45
BRCA2P51587 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRCA2P51587 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BRCA2P51587 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRCA2P51587 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRCA2P51587 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRCA2P51587 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
BRCA2P51587 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRCA2P51587 PCDHA4-204ENST00000618834 10557 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC5.99□□□□□ -1.45
BRCA2P51587 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRCA2P51587 OR9G4-201ENST00000302957 984 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.99□□□□□ -1.45
BRCA2P51587 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.99□□□□□ -1.45
BRCA2P51587 AC004890.3-201ENST00000605566 1095 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.99□□□□□ -1.45
BRCA2P51587 AC080128.2-201ENST00000641520 11863 ntBASIC5.99□□□□□ -1.45
BRCA2P51587 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRCA2P51587 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
BRCA2P51587 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.98□□□□□ -1.45
BRCA2P51587 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
BRCA2P51587 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
BRCA2P51587 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.98□□□□□ -1.45
BRCA2P51587 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
BRCA2P51587 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC5.98□□□□□ -1.45
BRCA2P51587 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
BRCA2P51587 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
BRCA2P51587 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
BRCA2P51587 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
BRCA2P51587 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.98□□□□□ -1.45
BRCA2P51587 GJA6P-201ENST00000415117 1042 ntBASIC5.98□□□□□ -1.45
BRCA2P51587 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.98□□□□□ -1.45
BRCA2P51587 snoU13.22-201ENST00000459428 104 ntBASIC5.98□□□□□ -1.45
BRCA2P51587 MIR6716-201ENST00000613413 80 ntBASIC5.98□□□□□ -1.45
BRCA2P51587 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.98□□□□□ -1.45
BRCA2P51587 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
BRCA2P51587 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
BRCA2P51587 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
BRCA2P51587 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
BRCA2P51587 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
BRCA2P51587 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BRCA2P51587 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BRCA2P51587 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BRCA2P51587 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BRCA2P51587 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
BRCA2P51587 AL132640.2-201ENST00000559968 1698 ntBASIC5.98□□□□□ -1.45
BRCA2P51587 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.98□□□□□ -1.45
BRCA2P51587 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
BRCA2P51587 RNA5SP332-201ENST00000391063 115 ntBASIC5.98□□□□□ -1.45
BRCA2P51587 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.98□□□□□ -1.45
BRCA2P51587 BMS1P19-201ENST00000433925 393 ntBASIC5.98□□□□□ -1.45
BRCA2P51587 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.98□□□□□ -1.45
BRCA2P51587 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.98□□□□□ -1.45
BRCA2P51587 AC021074.2-201ENST00000468434 172 ntBASIC5.98□□□□□ -1.45
BRCA2P51587 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.98□□□□□ -1.45
BRCA2P51587 AC005000.1-201ENST00000536192 288 ntBASIC5.98□□□□□ -1.45
BRCA2P51587 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.98□□□□□ -1.45
BRCA2P51587 MEMO1P5-201ENST00000604810 406 ntBASIC5.98□□□□□ -1.45
BRCA2P51587 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
BRCA2P51587 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
BRCA2P51587 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
BRCA2P51587 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BRCA2P51587 RNA5SP171-201ENST00000391071 115 ntBASIC5.97□□□□□ -1.45
BRCA2P51587 RNA5SP113-201ENST00000410486 84 ntBASIC5.97□□□□□ -1.45
BRCA2P51587 IGKV1OR22-5-201ENST00000458718 354 ntBASIC5.97□□□□□ -1.45
BRCA2P51587 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.97□□□□□ -1.45
BRCA2P51587 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.97□□□□□ -1.45
BRCA2P51587 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRCA2P51587 ZDHHC21-201ENST00000380916 9160 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRCA2P51587 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRCA2P51587 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRCA2P51587 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRCA2P51587 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
BRCA2P51587 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BRCA2P51587 OR7A15P-201ENST00000449848 1009 ntBASIC5.97□□□□□ -1.45
BRCA2P51587 AC140172.1-201ENST00000502928 141 ntBASIC5.97□□□□□ -1.45
BRCA2P51587 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.97□□□□□ -1.45
BRCA2P51587 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms