Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC9.94□□□□□ -0.82
SMARCA4P51532 AC009220.1-201ENST00000451614 275 ntBASIC9.94□□□□□ -0.82
SMARCA4P51532 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC9.94□□□□□ -0.82
SMARCA4P51532 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SMARCA4P51532 AC092490.3-201ENST00000545370 572 ntBASIC9.94□□□□□ -0.82
SMARCA4P51532 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC9.94□□□□□ -0.82
SMARCA4P51532 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC9.94□□□□□ -0.82
SMARCA4P51532 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
SMARCA4P51532 AC234771.5-201ENST00000600161 514 ntBASIC9.94□□□□□ -0.82
SMARCA4P51532 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC9.94□□□□□ -0.82
SMARCA4P51532 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC9.94□□□□□ -0.82
SMARCA4P51532 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMARCA4P51532 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMARCA4P51532 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMARCA4P51532 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMARCA4P51532 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMARCA4P51532 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SMARCA4P51532 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMARCA4P51532 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC9.93□□□□□ -0.82
SMARCA4P51532 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC9.93□□□□□ -0.82
SMARCA4P51532 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
SMARCA4P51532 SNORD8-201ENST00000363915 110 ntBASIC9.93□□□□□ -0.82
SMARCA4P51532 RN7SKP6-201ENST00000364795 319 ntBASIC9.93□□□□□ -0.82
SMARCA4P51532 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMARCA4P51532 RPS3AP38-201ENST00000435889 763 ntBASIC9.93□□□□□ -0.82
SMARCA4P51532 RHOT1P3-201ENST00000436571 331 ntBASIC9.93□□□□□ -0.82
SMARCA4P51532 AC006466.1-201ENST00000438721 289 ntBASIC9.93□□□□□ -0.82
SMARCA4P51532 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC9.93□□□□□ -0.82
SMARCA4P51532 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC9.93□□□□□ -0.82
SMARCA4P51532 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC9.93□□□□□ -0.82
SMARCA4P51532 CEACAMP10-202ENST00000495431 496 ntBASIC9.93□□□□□ -0.82
SMARCA4P51532 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC9.93□□□□□ -0.82
SMARCA4P51532 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC9.93□□□□□ -0.82
SMARCA4P51532 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC9.93□□□□□ -0.82
SMARCA4P51532 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SMARCA4P51532 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
SMARCA4P51532 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC9.93□□□□□ -0.82
SMARCA4P51532 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMARCA4P51532 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMARCA4P51532 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC9.93□□□□□ -0.82
SMARCA4P51532 AL590004.4-201ENST00000566733 7060 ntBASIC9.93□□□□□ -0.82
SMARCA4P51532 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC9.93□□□□□ -0.82
SMARCA4P51532 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMARCA4P51532 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC9.93□□□□□ -0.82
SMARCA4P51532 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SMARCA4P51532 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC9.93□□□□□ -0.82
SMARCA4P51532 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC9.93□□□□□ -0.82
SMARCA4P51532 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC9.93□□□□□ -0.82
SMARCA4P51532 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC9.93□□□□□ -0.82
SMARCA4P51532 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMARCA4P51532 INTS6P1-201ENST00000504674 2530 ntBASIC9.92□□□□□ -0.82
SMARCA4P51532 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SMARCA4P51532 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMARCA4P51532 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMARCA4P51532 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC9.92□□□□□ -0.82
SMARCA4P51532 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMARCA4P51532 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMARCA4P51532 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
SMARCA4P51532 RNA5SP326-201ENST00000363209 110 ntBASIC9.92□□□□□ -0.82
SMARCA4P51532 AL049745.1-201ENST00000433953 286 ntBASIC9.92□□□□□ -0.82
SMARCA4P51532 RPS29P33-201ENST00000456717 146 ntBASIC9.92□□□□□ -0.82
SMARCA4P51532 AGGF1P7-201ENST00000562369 913 ntBASIC9.92□□□□□ -0.82
SMARCA4P51532 AC007346.2-201ENST00000564816 892 ntBASIC9.92□□□□□ -0.82
SMARCA4P51532 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC9.92□□□□□ -0.82
SMARCA4P51532 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
SMARCA4P51532 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC9.92□□□□□ -0.82
SMARCA4P51532 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
SMARCA4P51532 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SMARCA4P51532 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC9.92□□□□□ -0.82
SMARCA4P51532 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SMARCA4P51532 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC9.92□□□□□ -0.82
SMARCA4P51532 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SMARCA4P51532 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SMARCA4P51532 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SMARCA4P51532 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
SMARCA4P51532 AC092070.2-203ENST00000598377 3644 ntBASIC9.91□□□□□ -0.82
SMARCA4P51532 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SMARCA4P51532 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SMARCA4P51532 DOCK11P1-201ENST00000553480 5932 ntBASIC9.91□□□□□ -0.82
SMARCA4P51532 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
SMARCA4P51532 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SMARCA4P51532 AC016397.1-201ENST00000412463 242 ntBASIC9.91□□□□□ -0.82
SMARCA4P51532 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC9.91□□□□□ -0.82
SMARCA4P51532 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC9.91□□□□□ -0.82
SMARCA4P51532 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC9.91□□□□□ -0.82
SMARCA4P51532 UBE2Q2P10-201ENST00000514854 900 ntBASIC9.91□□□□□ -0.82
SMARCA4P51532 RN7SKP147-201ENST00000517154 244 ntBASIC9.91□□□□□ -0.82
SMARCA4P51532 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC9.91□□□□□ -0.82
SMARCA4P51532 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC9.91□□□□□ -0.82
SMARCA4P51532 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC9.91□□□□□ -0.82
SMARCA4P51532 AL163952.1-202ENST00000569625 600 ntBASIC9.91□□□□□ -0.82
SMARCA4P51532 AC011447.4-201ENST00000587562 111 ntBASIC9.91□□□□□ -0.82
SMARCA4P51532 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC9.91□□□□□ -0.82
SMARCA4P51532 MVP-219ENST00000629059 120 ntTSL 5 BASIC9.91□□□□□ -0.82
SMARCA4P51532 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC9.91□□□□□ -0.82
SMARCA4P51532 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SMARCA4P51532 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC9.91□□□□□ -0.82
SMARCA4P51532 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC9.91□□□□□ -0.82
SMARCA4P51532 AC092821.2-201ENST00000545710 2042 ntBASIC9.91□□□□□ -0.82
SMARCA4P51532 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms