Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
RXRBP28702 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RXRBP28702 MFSD8-220ENST00000641243 1422 ntBASIC8.29□□□□□ -1.08
RXRBP28702 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RXRBP28702 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RXRBP28702 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RXRBP28702 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC8.29□□□□□ -1.08
RXRBP28702 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RXRBP28702 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
RXRBP28702 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RXRBP28702 RNA5SP65-201ENST00000363166 119 ntBASIC8.29□□□□□ -1.08
RXRBP28702 CD2-201ENST00000369477 478 ntTSL 2 BASIC8.29□□□□□ -1.08
RXRBP28702 RBBP4P4-201ENST00000398588 1289 ntBASIC8.29□□□□□ -1.08
RXRBP28702 SNORA81-201ENST00000408493 178 ntBASIC8.29□□□□□ -1.08
RXRBP28702 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC8.29□□□□□ -1.08
RXRBP28702 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC8.29□□□□□ -1.08
RXRBP28702 AL589823.1-201ENST00000429577 183 ntBASIC8.29□□□□□ -1.08
RXRBP28702 AL035246.1-201ENST00000433554 1255 ntBASIC8.29□□□□□ -1.08
RXRBP28702 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RXRBP28702 SALL1P1-201ENST00000438101 3837 ntBASIC8.29□□□□□ -1.08
RXRBP28702 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC8.29□□□□□ -1.08
RXRBP28702 RPL7L1P11-201ENST00000446092 721 ntBASIC8.29□□□□□ -1.08
RXRBP28702 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC8.29□□□□□ -1.08
RXRBP28702 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RXRBP28702 RN7SL705P-201ENST00000481678 294 ntBASIC8.29□□□□□ -1.08
RXRBP28702 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC8.29□□□□□ -1.08
RXRBP28702 OR2A20P-203ENST00000498397 1268 ntBASIC8.29□□□□□ -1.08
RXRBP28702 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC8.29□□□□□ -1.08
RXRBP28702 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RXRBP28702 SNORA70.17-201ENST00000516449 133 ntBASIC8.29□□□□□ -1.08
RXRBP28702 HNRNPCP1-201ENST00000556181 766 ntBASIC8.29□□□□□ -1.08
RXRBP28702 RPL10P14-201ENST00000565265 298 ntBASIC8.29□□□□□ -1.08
RXRBP28702 MTND3P13-201ENST00000574391 343 ntBASIC8.29□□□□□ -1.08
RXRBP28702 AC087575.1-201ENST00000585087 229 ntBASIC8.29□□□□□ -1.08
RXRBP28702 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC8.29□□□□□ -1.08
RXRBP28702 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC8.29□□□□□ -1.08
RXRBP28702 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RXRBP28702 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC8.29□□□□□ -1.08
RXRBP28702 CASC19-264ENST00000641912 1184 ntBASIC8.29□□□□□ -1.08
RXRBP28702 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RXRBP28702 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RXRBP28702 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC8.29□□□□□ -1.08
RXRBP28702 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.29□□□□□ -1.08
RXRBP28702 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.29□□□□□ -1.08
RXRBP28702 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RXRBP28702 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.29□□□□□ -1.08
RXRBP28702 AC009166.2-201ENST00000624410 2833 ntBASIC8.29□□□□□ -1.08
RXRBP28702 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RXRBP28702 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC8.28□□□□□ -1.08
RXRBP28702 AC015871.3-201ENST00000618835 2261 ntBASIC8.28□□□□□ -1.08
RXRBP28702 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RXRBP28702 AL161756.3-201ENST00000641216 2071 ntBASIC8.28□□□□□ -1.08
RXRBP28702 AL359922.2-201ENST00000581788 3017 ntBASIC8.28□□□□□ -1.08
RXRBP28702 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RXRBP28702 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RXRBP28702 AC131971.1-201ENST00000332881 1482 ntBASIC8.28□□□□□ -1.08
RXRBP28702 NRIR-201ENST00000366140 799 ntTSL 3 BASIC8.28□□□□□ -1.08
RXRBP28702 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
RXRBP28702 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RXRBP28702 AL645733.1-201ENST00000402250 217 ntBASIC8.28□□□□□ -1.08
RXRBP28702 AC016397.1-201ENST00000412463 242 ntBASIC8.28□□□□□ -1.08
RXRBP28702 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC8.28□□□□□ -1.08
RXRBP28702 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC8.28□□□□□ -1.08
RXRBP28702 GSTA6P-201ENST00000424144 582 ntBASIC8.28□□□□□ -1.08
RXRBP28702 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC8.28□□□□□ -1.08
RXRBP28702 VN1R54P-201ENST00000435210 1049 ntBASIC8.28□□□□□ -1.08
RXRBP28702 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC8.28□□□□□ -1.08
RXRBP28702 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RXRBP28702 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC8.28□□□□□ -1.08
RXRBP28702 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC8.28□□□□□ -1.08
RXRBP28702 LRRC37A14P-201ENST00000452297 462 ntBASIC8.28□□□□□ -1.08
RXRBP28702 AC006463.2-201ENST00000473326 348 ntBASIC8.28□□□□□ -1.08
RXRBP28702 CDC42P3-201ENST00000518493 633 ntBASIC8.28□□□□□ -1.08
RXRBP28702 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC8.28□□□□□ -1.08
RXRBP28702 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC8.28□□□□□ -1.08
RXRBP28702 AL512310.9-201ENST00000553311 948 ntBASIC8.28□□□□□ -1.08
RXRBP28702 AL132857.1-201ENST00000555180 708 ntBASIC8.28□□□□□ -1.08
RXRBP28702 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC8.28□□□□□ -1.08
RXRBP28702 AL512329.2-201ENST00000607350 548 ntBASIC8.28□□□□□ -1.08
RXRBP28702 AC022106.1-201ENST00000612834 766 ntBASIC8.28□□□□□ -1.08
RXRBP28702 AC021755.4-201ENST00000616620 456 ntBASIC8.28□□□□□ -1.08
RXRBP28702 AC097460.3-201ENST00000623099 442 ntBASIC8.28□□□□□ -1.08
RXRBP28702 AP003476.1-201ENST00000623984 516 ntBASIC8.28□□□□□ -1.08
RXRBP28702 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RXRBP28702 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RXRBP28702 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RXRBP28702 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8.28□□□□□ -1.08
RXRBP28702 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RXRBP28702 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
RXRBP28702 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
RXRBP28702 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC8.28□□□□□ -1.08
RXRBP28702 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RXRBP28702 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC8.28□□□□□ -1.08
RXRBP28702 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.08
RXRBP28702 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
RXRBP28702 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.27□□□□□ -1.08
RXRBP28702 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RXRBP28702 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.27□□□□□ -1.09
RXRBP28702 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
RXRBP28702 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms