Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNA5SP375-201ENST00000362975 119 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 RNU1-49P-201ENST00000363468 159 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 RNA5SP211-201ENST00000365516 117 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 E2F6P1-201ENST00000428850 745 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 E2F6P3-201ENST00000441743 743 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 PA2G4P1-201ENST00000442248 1197 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AL121578.2-201ENST00000448797 447 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 OR52E3P-201ENST00000452083 936 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 SDC4P-201ENST00000453285 601 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 MEMO1P4-201ENST00000453590 386 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 RN7SL369P-201ENST00000477138 299 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC006539.1-201ENST00000481419 501 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC098976.1-201ENST00000513014 541 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC021146.10-201ENST00000515628 706 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC113191.1-201ENST00000517759 403 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 IGHVIII-11-1-201ENST00000522733 267 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 OR9G2P-201ENST00000533326 880 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC037479.1-201ENST00000558361 625 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC092718.4-201ENST00000566639 716 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 CCDC58P1-201ENST00000578567 430 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 RN7SL32P-201ENST00000580514 281 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 uc_338.26-201ENST00000612659 160 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 MIR6774-201ENST00000614651 70 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 BNIP3P41-202ENST00000616656 861 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AL445670.1-201ENST00000618889 801 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC068213.1-201ENST00000625124 226 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC073136.1-201ENST00000449426 2884 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.36□□□□□ -1.71
HLA-DQA1P01909 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQA1P01909 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 AL360270.2-201ENST00000562952 5985 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 AC097063.1-201ENST00000426714 1797 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 AC119674.1-202ENST00000641333 1860 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 OR10R3P-201ENST00000361688 942 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 RNU1-5P-201ENST00000362684 144 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 RNA5SP140-201ENST00000364524 92 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 RPS15AP30-201ENST00000420976 390 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 HSPE1P16-201ENST00000426640 348 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 AL645939.3-201ENST00000435408 225 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 RPS19P6-201ENST00000441327 433 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 HMGN1P32-201ENST00000441744 256 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 OR52I1-201ENST00000450052 1050 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 AC063955.1-201ENST00000462872 685 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 OR7E22P-201ENST00000478335 1035 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 RPL38P3-201ENST00000484463 213 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 HNRNPA1P74-201ENST00000560782 835 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms