Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.66□□□□□ -1.5
TNFP01375 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TNFP01375 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TNFP01375 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TNFP01375 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TNFP01375 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TNFP01375 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TNFP01375 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.66□□□□□ -1.5
TNFP01375 SNORD1C-201ENST00000363315 78 ntBASIC5.66□□□□□ -1.5
TNFP01375 OR6E1P-201ENST00000414424 923 ntBASIC5.66□□□□□ -1.5
TNFP01375 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.66□□□□□ -1.5
TNFP01375 AC113412.1-201ENST00000425840 504 ntBASIC5.66□□□□□ -1.5
TNFP01375 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.66□□□□□ -1.5
TNFP01375 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TNFP01375 AC015983.1-201ENST00000441577 373 ntBASIC5.66□□□□□ -1.5
TNFP01375 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.66□□□□□ -1.5
TNFP01375 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
TNFP01375 EIF3LP3-201ENST00000495197 822 ntBASIC5.66□□□□□ -1.5
TNFP01375 FTH1P8-201ENST00000498161 514 ntBASIC5.66□□□□□ -1.5
TNFP01375 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.66□□□□□ -1.5
TNFP01375 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TNFP01375 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
TNFP01375 ATP5LP3-201ENST00000514223 304 ntBASIC5.66□□□□□ -1.5
TNFP01375 RNA5SP362-201ENST00000516048 118 ntBASIC5.66□□□□□ -1.5
TNFP01375 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TNFP01375 MRPS16P1-201ENST00000523462 412 ntBASIC5.66□□□□□ -1.5
TNFP01375 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.66□□□□□ -1.5
TNFP01375 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.66□□□□□ -1.5
TNFP01375 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.66□□□□□ -1.5
TNFP01375 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.66□□□□□ -1.5
TNFP01375 AC096996.1-201ENST00000563813 325 ntBASIC5.66□□□□□ -1.5
TNFP01375 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TNFP01375 AC090607.5-201ENST00000615692 224 ntBASIC5.66□□□□□ -1.5
TNFP01375 AL355974.3-201ENST00000617383 467 ntBASIC5.66□□□□□ -1.5
TNFP01375 CU639417.4-201ENST00000623928 207 ntBASIC5.66□□□□□ -1.5
TNFP01375 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TNFP01375 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
TNFP01375 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.66□□□□□ -1.5
TNFP01375 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.66□□□□□ -1.5
TNFP01375 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TNFP01375 CIR1P2-201ENST00000514821 1342 ntBASIC5.66□□□□□ -1.5
TNFP01375 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
TNFP01375 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TNFP01375 RARSP1-201ENST00000542842 1418 ntBASIC5.65□□□□□ -1.5
TNFP01375 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TNFP01375 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.65□□□□□ -1.5
TNFP01375 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.65□□□□□ -1.5
TNFP01375 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TNFP01375 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TNFP01375 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
TNFP01375 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TNFP01375 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TNFP01375 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.65□□□□□ -1.5
TNFP01375 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.65□□□□□ -1.5
TNFP01375 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
TNFP01375 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.65□□□□□ -1.5
TNFP01375 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFP01375 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFP01375 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFP01375 AC096775.1-201ENST00000437724 448 ntBASIC5.65□□□□□ -1.5
TNFP01375 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TNFP01375 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.65□□□□□ -1.5
TNFP01375 OSTCP1-201ENST00000455507 450 ntBASIC5.65□□□□□ -1.5
TNFP01375 RPL5P12-201ENST00000477071 851 ntBASIC5.65□□□□□ -1.5
TNFP01375 AC079080.1-201ENST00000479841 822 ntBASIC5.65□□□□□ -1.5
TNFP01375 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFP01375 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.65□□□□□ -1.5
TNFP01375 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.65□□□□□ -1.5
TNFP01375 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.65□□□□□ -1.5
TNFP01375 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TNFP01375 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.65□□□□□ -1.5
TNFP01375 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TNFP01375 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TNFP01375 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.65□□□□□ -1.5
TNFP01375 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.65□□□□□ -1.5
TNFP01375 AC063977.5-201ENST00000601044 974 ntBASIC5.65□□□□□ -1.5
TNFP01375 MIR6826-201ENST00000617808 98 ntBASIC5.65□□□□□ -1.5
TNFP01375 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.65□□□□□ -1.5
TNFP01375 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TNFP01375 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TNFP01375 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TNFP01375 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TNFP01375 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.65□□□□□ -1.51
TNFP01375 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TNFP01375 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TNFP01375 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
TNFP01375 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
TNFP01375 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TNFP01375 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
TNFP01375 GTF2IP4-201ENST00000453092 2054 ntBASIC5.65□□□□□ -1.51
TNFP01375 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
TNFP01375 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.65□□□□□ -1.51
TNFP01375 AC114786.1-201ENST00000512892 1415 ntBASIC5.65□□□□□ -1.51
TNFP01375 MFSD8-219ENST00000641228 2559 ntBASIC5.64□□□□□ -1.51
TNFP01375 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
TNFP01375 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TNFP01375 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TNFP01375 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TNFP01375 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFP01375 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms