Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.85□□□□□ -1.47
LDLRP01130 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
LDLRP01130 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.85□□□□□ -1.47
LDLRP01130 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.85□□□□□ -1.47
LDLRP01130 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.85□□□□□ -1.47
LDLRP01130 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LDLRP01130 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.85□□□□□ -1.47
LDLRP01130 AC092944.2-201ENST00000605443 889 ntBASIC5.85□□□□□ -1.47
LDLRP01130 AL136370.1-201ENST00000608166 691 ntBASIC5.85□□□□□ -1.47
LDLRP01130 AC239803.2-201ENST00000610161 430 ntBASIC5.85□□□□□ -1.47
LDLRP01130 MIR6798-201ENST00000612887 67 ntBASIC5.85□□□□□ -1.47
LDLRP01130 AC016911.1-201ENST00000613297 452 ntBASIC5.85□□□□□ -1.47
LDLRP01130 MTCO1P1-201ENST00000624263 1081 ntBASIC5.85□□□□□ -1.47
LDLRP01130 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.85□□□□□ -1.47
LDLRP01130 AC129915.3-201ENST00000634128 948 ntBASIC5.85□□□□□ -1.47
LDLRP01130 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LDLRP01130 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
LDLRP01130 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LDLRP01130 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.85□□□□□ -1.47
LDLRP01130 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LDLRP01130 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LDLRP01130 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.85□□□□□ -1.47
LDLRP01130 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.85□□□□□ -1.47
LDLRP01130 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LDLRP01130 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LDLRP01130 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LDLRP01130 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LDLRP01130 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.84□□□□□ -1.47
LDLRP01130 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LDLRP01130 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LDLRP01130 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LDLRP01130 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
LDLRP01130 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
LDLRP01130 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.84□□□□□ -1.47
LDLRP01130 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
LDLRP01130 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LDLRP01130 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.84□□□□□ -1.47
LDLRP01130 AL445238.1-204ENST00000400311 463 ntBASIC5.84□□□□□ -1.47
LDLRP01130 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.84□□□□□ -1.47
LDLRP01130 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.84□□□□□ -1.47
LDLRP01130 USP24P1-201ENST00000433802 779 ntBASIC5.84□□□□□ -1.47
LDLRP01130 RPS3AP38-201ENST00000435889 763 ntBASIC5.84□□□□□ -1.47
LDLRP01130 KRT8P51-201ENST00000438938 274 ntBASIC5.84□□□□□ -1.47
LDLRP01130 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LDLRP01130 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LDLRP01130 HLA-DPA3-207ENST00000454398 229 ntBASIC5.84□□□□□ -1.47
LDLRP01130 OSTCP1-201ENST00000455507 450 ntBASIC5.84□□□□□ -1.47
LDLRP01130 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.84□□□□□ -1.47
LDLRP01130 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.84□□□□□ -1.47
LDLRP01130 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.84□□□□□ -1.47
LDLRP01130 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.84□□□□□ -1.47
LDLRP01130 RNU6-1334P-201ENST00000516032 105 ntBASIC5.84□□□□□ -1.47
LDLRP01130 AC060775.1-201ENST00000518241 520 ntBASIC5.84□□□□□ -1.47
LDLRP01130 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.84□□□□□ -1.47
LDLRP01130 AC136777.2-201ENST00000522979 358 ntBASIC5.84□□□□□ -1.47
LDLRP01130 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.84□□□□□ -1.47
LDLRP01130 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LDLRP01130 AL133399.1-201ENST00000527476 298 ntBASIC5.84□□□□□ -1.47
LDLRP01130 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.84□□□□□ -1.47
LDLRP01130 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.84□□□□□ -1.47
LDLRP01130 AC079905.1-201ENST00000549280 475 ntBASIC5.84□□□□□ -1.47
LDLRP01130 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.84□□□□□ -1.47
LDLRP01130 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.84□□□□□ -1.47
LDLRP01130 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.84□□□□□ -1.47
LDLRP01130 AC090286.3-201ENST00000573133 187 ntBASIC5.84□□□□□ -1.47
LDLRP01130 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LDLRP01130 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.84□□□□□ -1.47
LDLRP01130 AC027229.1-201ENST00000583887 253 ntBASIC5.84□□□□□ -1.47
LDLRP01130 AC025857.2-201ENST00000602711 238 ntBASIC5.84□□□□□ -1.47
LDLRP01130 AC013244.1-201ENST00000604279 193 ntBASIC5.84□□□□□ -1.47
LDLRP01130 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.84□□□□□ -1.47
LDLRP01130 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.84□□□□□ -1.47
LDLRP01130 AC092266.1-201ENST00000610958 165 ntBASIC5.84□□□□□ -1.47
LDLRP01130 MIR6085-201ENST00000618314 110 ntBASIC5.84□□□□□ -1.47
LDLRP01130 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.84□□□□□ -1.47
LDLRP01130 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.84□□□□□ -1.47
LDLRP01130 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LDLRP01130 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.84□□□□□ -1.47
LDLRP01130 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LDLRP01130 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.84□□□□□ -1.47
LDLRP01130 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
LDLRP01130 HSPD1P9-201ENST00000420325 1636 ntBASIC5.84□□□□□ -1.47
LDLRP01130 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
LDLRP01130 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
LDLRP01130 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
LDLRP01130 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
LDLRP01130 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.84□□□□□ -1.48
LDLRP01130 MTCO1P28-201ENST00000574177 1528 ntBASIC5.84□□□□□ -1.48
LDLRP01130 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
LDLRP01130 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LDLRP01130 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LDLRP01130 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
LDLRP01130 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LDLRP01130 AC239868.2-201ENST00000564237 4527 ntBASIC5.83□□□□□ -1.48
LDLRP01130 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
LDLRP01130 AL355488.2-201ENST00000609909 2850 ntBASIC5.83□□□□□ -1.48
LDLRP01130 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms