Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
O00370 AL354766.1-201ENST00000423396 542 ntBASIC6.27□□□□□ -1.41
O00370 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.27□□□□□ -1.41
O00370 AC073410.1-201ENST00000435125 589 ntBASIC6.27□□□□□ -1.41
O00370 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
O00370 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.27□□□□□ -1.41
O00370 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
O00370 PFN1P6-201ENST00000476786 399 ntBASIC6.27□□□□□ -1.41
O00370 Y_RNA.667-201ENST00000516212 107 ntBASIC6.27□□□□□ -1.41
O00370 RNA5SP438-201ENST00000516561 112 ntBASIC6.27□□□□□ -1.41
O00370 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.27□□□□□ -1.41
O00370 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.27□□□□□ -1.41
O00370 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.27□□□□□ -1.41
O00370 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.27□□□□□ -1.41
O00370 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.27□□□□□ -1.41
O00370 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.27□□□□□ -1.41
O00370 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.27□□□□□ -1.41
O00370 SNX18P12-201ENST00000624821 759 ntBASIC6.27□□□□□ -1.41
O00370 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.27□□□□□ -1.41
O00370 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.27□□□□□ -1.41
O00370 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
O00370 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
O00370 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.27□□□□□ -1.41
O00370 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
O00370 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
O00370 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.27□□□□□ -1.41
O00370 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
O00370 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
O00370 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.26□□□□□ -1.41
O00370 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
O00370 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
O00370 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
O00370 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.26□□□□□ -1.41
O00370 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
O00370 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
O00370 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
O00370 AC012078.1-201ENST00000405035 1646 ntBASIC6.26□□□□□ -1.41
O00370 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.26□□□□□ -1.41
O00370 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.26□□□□□ -1.41
O00370 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
O00370 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
O00370 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
O00370 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
O00370 TMSB4XP2-201ENST00000335179 210 ntBASIC6.26□□□□□ -1.41
O00370 RNU1-150P-201ENST00000362491 162 ntBASIC6.26□□□□□ -1.41
O00370 RNA5SP453-201ENST00000362503 119 ntBASIC6.26□□□□□ -1.41
O00370 SUGT1P2-201ENST00000379452 992 ntBASIC6.26□□□□□ -1.41
O00370 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.26□□□□□ -1.41
O00370 AC066692.1-201ENST00000421721 457 ntBASIC6.26□□□□□ -1.41
O00370 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.26□□□□□ -1.41
O00370 BX276092.6-201ENST00000430476 250 ntBASIC6.26□□□□□ -1.41
O00370 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.26□□□□□ -1.41
O00370 NDUFS5P5-201ENST00000437256 321 ntBASIC6.26□□□□□ -1.41
O00370 TUBB4BP6-201ENST00000437576 479 ntBASIC6.26□□□□□ -1.41
O00370 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
O00370 DNAJA1P5-201ENST00000440278 943 ntBASIC6.26□□□□□ -1.41
O00370 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.26□□□□□ -1.41
O00370 BX276092.8-201ENST00000455722 250 ntBASIC6.26□□□□□ -1.41
O00370 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.26□□□□□ -1.41
O00370 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.26□□□□□ -1.41
O00370 GOLGA5P1-201ENST00000507317 980 ntBASIC6.26□□□□□ -1.41
O00370 ST13P12-201ENST00000508958 1094 ntBASIC6.26□□□□□ -1.41
O00370 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.26□□□□□ -1.41
O00370 AC060775.1-201ENST00000518241 520 ntBASIC6.26□□□□□ -1.41
O00370 TRIM77BP-201ENST00000524985 1119 ntBASIC6.26□□□□□ -1.41
O00370 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.26□□□□□ -1.41
O00370 AC068305.2-201ENST00000550567 1205 ntBASIC6.26□□□□□ -1.41
O00370 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.26□□□□□ -1.41
O00370 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
O00370 GARSP1-201ENST00000570895 719 ntBASIC6.26□□□□□ -1.41
O00370 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.26□□□□□ -1.41
O00370 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.26□□□□□ -1.41
O00370 AC145423.1-201ENST00000605712 336 ntBASIC6.26□□□□□ -1.41
O00370 AC108865.2-201ENST00000606881 432 ntBASIC6.26□□□□□ -1.41
O00370 AL445670.1-201ENST00000618889 801 ntBASIC6.26□□□□□ -1.41
O00370 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.26□□□□□ -1.41
O00370 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
O00370 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
O00370 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.26□□□□□ -1.41
O00370 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
O00370 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
O00370 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
O00370 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
O00370 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
O00370 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
O00370 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
O00370 AC011933.2-201ENST00000578539 2790 ntBASIC6.25□□□□□ -1.41
O00370 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
O00370 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
O00370 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
O00370 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
O00370 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
O00370 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.25□□□□□ -1.41
O00370 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.25□□□□□ -1.41
O00370 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.25□□□□□ -1.41
O00370 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
O00370 PARP4P2-201ENST00000446672 3326 ntBASIC6.25□□□□□ -1.41
O00370 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.25□□□□□ -1.41
O00370 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.25□□□□□ -1.41
O00370 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms