Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM1O00151 SNORA74.1-201ENST00000516320 180 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 AC135983.3-201ENST00000528049 1226 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM1O00151 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.69□□□□□ -1.5
PDLIM1O00151 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM1O00151 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM1O00151 AC012368.3-201ENST00000604190 219 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 WBP1LP12-201ENST00000604449 331 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 AC011891.2-201ENST00000604949 397 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 MIR6889-201ENST00000613185 59 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM1O00151 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PDLIM1O00151 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM1O00151 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PDLIM1O00151 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM1O00151 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
PDLIM1O00151 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM1O00151 AC011933.2-201ENST00000578539 2790 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 AP001642.1-201ENST00000624727 2117 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM1O00151 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM1O00151 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.68□□□□□ -1.5
PDLIM1O00151 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.68□□□□□ -1.5
PDLIM1O00151 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PDLIM1O00151 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM1O00151 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.68□□□□□ -1.5
PDLIM1O00151 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM1O00151 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.68□□□□□ -1.5
PDLIM1O00151 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM1O00151 RBPJP2-201ENST00000618187 1444 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.68□□□□□ -1.5
PDLIM1O00151 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PDLIM1O00151 RN7SKP250-201ENST00000363924 321 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.68□□□□□ -1.5
PDLIM1O00151 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.68□□□□□ -1.5
PDLIM1O00151 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM1O00151 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PDLIM1O00151 PRELID1P1-201ENST00000403549 660 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM1O00151 AC002127.1-201ENST00000421305 225 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 AL121578.1-201ENST00000428051 892 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM1O00151 AC092447.2-201ENST00000435487 669 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.68□□□□□ -1.5
PDLIM1O00151 MORF4-201ENST00000447135 971 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 AC044810.1-201ENST00000480271 711 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 RN7SL346P-201ENST00000491561 294 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.68□□□□□ -1.5
PDLIM1O00151 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.68□□□□□ -1.5
PDLIM1O00151 AC022616.2-201ENST00000523185 300 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM1O00151 AP003033.2-201ENST00000528901 805 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.68□□□□□ -1.5
PDLIM1O00151 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.68□□□□□ -1.5
PDLIM1O00151 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.68□□□□□ -1.5
PDLIM1O00151 AC107993.1-201ENST00000591343 684 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.68□□□□□ -1.5
PDLIM1O00151 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 AC022400.9-201ENST00000623633 273 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.68□□□□□ -1.5
PDLIM1O00151 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.68□□□□□ -1.5
PDLIM1O00151 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PDLIM1O00151 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PDLIM1O00151 AC239868.2-201ENST00000564237 4527 ntBASIC5.68□□□□□ -1.5
PDLIM1O00151 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM1O00151 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PDLIM1O00151 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PDLIM1O00151 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM1O00151 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM1O00151 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.67□□□□□ -1.5
PDLIM1O00151 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM1O00151 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM1O00151 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.67□□□□□ -1.5
PDLIM1O00151 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM1O00151 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PDLIM1O00151 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.67□□□□□ -1.5
PDLIM1O00151 RNA5SP487-201ENST00000410186 122 ntBASIC5.67□□□□□ -1.5
PDLIM1O00151 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.67□□□□□ -1.5
PDLIM1O00151 PTCD2P2-201ENST00000415579 1095 ntBASIC5.67□□□□□ -1.5
PDLIM1O00151 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.67□□□□□ -1.5
PDLIM1O00151 THEM7P-201ENST00000419556 672 ntBASIC5.67□□□□□ -1.5
PDLIM1O00151 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.67□□□□□ -1.5
PDLIM1O00151 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.67□□□□□ -1.5
PDLIM1O00151 RPL34P6-201ENST00000432390 345 ntBASIC5.67□□□□□ -1.5
PDLIM1O00151 GTF3AP6-201ENST00000432585 986 ntBASIC5.67□□□□□ -1.5
PDLIM1O00151 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.67□□□□□ -1.5
PDLIM1O00151 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.67□□□□□ -1.5
PDLIM1O00151 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.67□□□□□ -1.5
PDLIM1O00151 RN7SL39P-201ENST00000462264 297 ntBASIC5.67□□□□□ -1.5
PDLIM1O00151 AC117500.1-201ENST00000497352 755 ntBASIC5.67□□□□□ -1.5
PDLIM1O00151 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM1O00151 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.67□□□□□ -1.5
PDLIM1O00151 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.67□□□□□ -1.5
PDLIM1O00151 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.67□□□□□ -1.5
PDLIM1O00151 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.67□□□□□ -1.5
PDLIM1O00151 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.67□□□□□ -1.5
PDLIM1O00151 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.67□□□□□ -1.5
PDLIM1O00151 AC116158.1-201ENST00000560231 2129 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms