Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 DHFRP1-201ENST00000579682 559 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AC008507.3-201ENST00000585753 472 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AP001437.1-201ENST00000608783 456 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 MIR6793-201ENST00000612376 63 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AL031658.2-201ENST00000616850 651 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 CASC19-274ENST00000642018 970 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 AL161901.1-201ENST00000624954 3425 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 PDZK1P1-202ENST00000425209 1350 ntBASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAV27A0A087WT01 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRAV27A0A087WT01 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRAV27A0A087WT01 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
TRAV27A0A087WT01 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRAV27A0A087WT01 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.15□□□□□ -1.58
TRAV27A0A087WT01 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
TRAV27A0A087WT01 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
TRAV27A0A087WT01 GVINP1-202ENST00000531871 7271 ntBASIC5.15□□□□□ -1.58
TRAV27A0A087WT01 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRAV27A0A087WT01 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRAV27A0A087WT01 LYARP1-201ENST00000436977 1501 ntBASIC5.15□□□□□ -1.58
TRAV27A0A087WT01 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.15□□□□□ -1.58
TRAV27A0A087WT01 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 AL121886.1-201ENST00000358609 435 ntBASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 RNA5SP500-201ENST00000364486 119 ntBASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 AC005042.1-201ENST00000393397 800 ntBASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 MTND2P40-201ENST00000436718 841 ntBASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 RBBP4P1-201ENST00000502424 1276 ntBASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 AC084121.1-201ENST00000533882 835 ntBASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 AL845552.1-201ENST00000556820 323 ntBASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 CYCSP38-201ENST00000559840 322 ntBASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 FAM27E4-201ENST00000605259 342 ntBASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRAV27A0A087WT01 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 TMSB4XP2-201ENST00000335179 210 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 TMEM183AP1-205ENST00000432739 290 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 MRPS21P3-201ENST00000436696 262 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AMYP1-201ENST00000440059 1023 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 MED28P3-201ENST00000444288 531 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AC093166.3-201ENST00000448785 303 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AL122020.1-201ENST00000472287 459 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 RPL32P33-201ENST00000487023 394 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 RPS17P5-201ENST00000498293 408 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AC092349.1-201ENST00000504903 310 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AC093815.1-201ENST00000508637 280 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AC097486.1-201ENST00000515331 210 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms