Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 RNA5SP211-201ENST00000365516 117 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AC016739.1-201ENST00000405359 345 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 RNA5SP251-201ENST00000410614 137 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 SLC20A1P1-201ENST00000413906 956 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AC117434.1-201ENST00000419971 836 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 RPL12P11-201ENST00000439970 501 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 CUBNP2-201ENST00000443534 1139 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AL035690.1-201ENST00000490892 383 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AC090568.1-201ENST00000509499 856 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 RN7SKP67-201ENST00000515905 235 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 TRIM51DP-201ENST00000529746 596 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 HNRNPCP1-201ENST00000556181 766 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 MIR4310-201ENST00000582950 57 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 AC006213.5-201ENST00000619673 288 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 SNX18P12-201ENST00000624821 759 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 THAP12P9-201ENST00000503971 2360 ntBASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SNX9Q9Y5X1 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 RPS4XP5-201ENST00000419038 768 ntBASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AL035660.1-201ENST00000422041 222 ntBASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AC012497.1-201ENST00000429392 575 ntBASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 RSL24D1P2-201ENST00000445584 366 ntBASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AC084754.1-201ENST00000463466 464 ntBASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 RN7SL57P-201ENST00000493687 290 ntBASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 MTND2P31-201ENST00000512602 616 ntBASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 ACTR6P1-201ENST00000514311 1104 ntBASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AC006530.1-201ENST00000555980 571 ntBASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AC125494.2-201ENST00000602431 657 ntBASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AL583832.1-201ENST00000603227 784 ntBASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AC100767.2-201ENST00000604840 693 ntBASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AL357153.4-201ENST00000620487 1016 ntBASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms