Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 SNX18P26-201ENST00000458433 740 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 RNU7-157P-201ENST00000459600 66 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AC093801.2-201ENST00000503966 1050 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 OR4D12P-201ENST00000509361 911 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AC010343.2-201ENST00000510162 224 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 SNX18P25-201ENST00000510539 758 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AC117525.1-201ENST00000515228 503 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AC020937.1-201ENST00000519677 1013 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 HNRNPCP1-201ENST00000556181 766 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AL121594.4-201ENST00000556211 1196 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AC104072.1-201ENST00000568817 668 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AC067852.5-201ENST00000589299 310 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AC079315.1-201ENST00000602952 623 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AP000894.4-201ENST00000610185 483 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 PROS2P-201ENST00000474651 1951 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 AC020633.1-201ENST00000468439 2247 ntBASIC6.38□□□□□ -1.39
DKK3Q9UBP4 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.38□□□□□ -1.39
DKK3Q9UBP4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC093671.1-201ENST00000624981 2929 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 RN7SKP237-201ENST00000364663 301 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC092865.3-201ENST00000425390 1026 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC108479.1-201ENST00000431142 427 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 MTND1P26-201ENST00000440488 538 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 MTND6P5-201ENST00000448266 512 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 MORF4L1P4-201ENST00000450245 976 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC021006.1-201ENST00000489849 553 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 RPL17P2-201ENST00000491913 451 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 TRAV31-201ENST00000502780 342 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 NPM1P27-201ENST00000502784 830 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC105420.1-201ENST00000504389 582 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC011411.1-201ENST00000509592 876 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC108103.1-201ENST00000511286 446 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 HSD3BP3-201ENST00000514706 994 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 RNA5SP441-201ENST00000516809 88 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC005363.1-201ENST00000530779 351 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 NPIPB14P-203ENST00000532298 987 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC026826.3-201ENST00000561747 158 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC106785.3-201ENST00000564064 847 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC027216.1-201ENST00000577726 685 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC034236.3-201ENST00000605999 461 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AC015982.1-201ENST00000608113 465 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 AL008723.3-201ENST00000608926 449 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 MIR7159-201ENST00000620587 66 ntBASIC6.37□□□□□ -1.39
DKK3Q9UBP4 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
DKK3Q9UBP4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms