Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 PEX12P1-201ENST00000400284 1048 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 RN7SKP38-201ENST00000410782 309 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 RPL12P49-201ENST00000441100 121 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 OR7E116P-201ENST00000448529 957 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AC092865.4-201ENST00000477936 615 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 RPS17P5-201ENST00000498293 408 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 MAST4-IT1-201ENST00000514241 658 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AC113191.1-201ENST00000517759 403 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 WBP1LP11-201ENST00000586141 328 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AL353684.1-201ENST00000622677 1120 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AL034546.1-201ENST00000623740 3693 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AL357140.4-201ENST00000636827 412 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AC007603.3-201ENST00000636915 979 ntBASIC5.44□□□□□ -1.54
VAPAQ9P0L0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.44□□□□□ -1.54
VAPAQ9P0L0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 MIR130A-201ENST00000385274 89 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 YWHAZP6-201ENST00000399764 738 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 AC096921.1-201ENST00000411661 375 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 AC108479.1-201ENST00000431142 427 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 DEFA9P-201ENST00000433042 285 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 MEMO1P4-201ENST00000453590 386 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 GEMIN2P1-201ENST00000454246 752 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 DUTP1-201ENST00000493631 470 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 NACAP5-201ENST00000509863 636 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 AC108103.1-201ENST00000511286 446 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 RNA5SP441-201ENST00000516809 88 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 AC139697.1-201ENST00000548429 745 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 DHFRP1-201ENST00000579682 559 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 AL136228.1-201ENST00000622221 319 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 HSPD1P7-201ENST00000447985 1686 ntBASIC5.43□□□□□ -1.54
VAPAQ9P0L0 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VAPAQ9P0L0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 MIR133A2-201ENST00000347538 102 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms