Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MTCO1P53-201ENST00000441633 699 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 LRRC37A14P-201ENST00000452297 462 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 BZW1P1-201ENST00000454901 1240 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 PRDX3P4-201ENST00000470828 747 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 AC022415.1-202ENST00000486612 523 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 RNU6-491P-201ENST00000516099 110 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 GTF2IP11-201ENST00000526931 420 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 AGGF1P6-201ENST00000569213 976 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 AP001094.1-201ENST00000579805 193 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 AL953862.2-201ENST00000603089 820 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 AC004775.1-201ENST00000607389 753 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 AC018690.1-201ENST00000608144 626 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 AL445647.2-201ENST00000615170 130 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 MIR6085-201ENST00000618314 110 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 MAPK10-365ENST00000641902 3825 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 MTND4P4-201ENST00000439033 1366 ntBASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PDLIM7Q9NR12 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 RNU1-24P-201ENST00000364285 165 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 MIR421-201ENST00000365696 85 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 MIR130B-202ENST00000385018 82 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 RNA5SP178-201ENST00000410380 128 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 RPL22P18-201ENST00000417197 377 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 KRR1P1-201ENST00000419430 803 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 RPL12P43-201ENST00000420608 499 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AL139415.1-201ENST00000424862 352 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 MTCO3P5-201ENST00000433620 714 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 TXNP2-201ENST00000443918 295 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 RPL7P33-201ENST00000444159 742 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 RN7SL273P-201ENST00000481561 299 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC091163.3-201ENST00000518269 1144 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC027544.3-201ENST00000535082 757 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC139493.1-201ENST00000604368 397 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AL139344.1-201ENST00000605228 195 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 OR7A19P-201ENST00000608051 733 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 FAM27E2-201ENST00000619668 403 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms