Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RN7SL787P-201ENST00000613000 284 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AL512624.1-201ENST00000613638 469 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AL049767.1-202ENST00000637826 242 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 AC106872.5-201ENST00000508856 1416 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 CASC19-255ENST00000641733 1385 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 MTCO1P7-201ENST00000419523 1542 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 SHQ1P1-201ENST00000437111 1544 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 BIN2P1-201ENST00000504996 1530 ntBASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TM9SF3Q9HD45 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 RBPJP7-201ENST00000442803 1447 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 RBPJP5-201ENST00000449433 1447 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 MIR433-201ENST00000384837 93 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 CYP4F30P-202ENST00000420048 405 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 PRUNEP1-201ENST00000425846 705 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 BX119321.1-201ENST00000428912 797 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 TUBB4BP6-201ENST00000437576 479 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC103563.5-201ENST00000455643 364 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 RPS4XP14-201ENST00000493072 781 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 RN7SL284P-201ENST00000498823 275 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 OR4H6P-201ENST00000563771 921 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 SNORD95-201ENST00000579879 68 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 NPM1P45-201ENST00000583151 559 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 RNA5SP440-201ENST00000612665 119 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC004477.3-201ENST00000614061 590 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC022467.1-201ENST00000614738 749 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AL357562.1-201ENST00000624911 609 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 OR8G3P-202ENST00000641572 1255 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 WDR95P-201ENST00000425638 1542 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 NEPNP-201ENST00000404786 1371 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC027088.4-201ENST00000611559 1947 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC018628.1-201ENST00000624147 3819 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 GNL2P1-201ENST00000451274 2190 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC024587.1-201ENST00000505925 2157 ntBASIC6.03□□□□□ -1.44
TM9SF3Q9HD45 AC119674.1-202ENST00000641333 1860 ntBASIC6.02□□□□□ -1.44
TM9SF3Q9HD45 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.44
TM9SF3Q9HD45 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 U3.25-201ENST00000391209 220 ntBASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 RPS3AP2-201ENST00000407190 754 ntBASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 RPL35AP3-201ENST00000414680 288 ntBASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.02□□□□□ -1.45
TM9SF3Q9HD45 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms