Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 TUBB4BP6-201ENST00000437576 479 ntBASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 RN7SL72P-201ENST00000460697 269 ntBASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 RPS17P15-201ENST00000475609 349 ntBASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 AC139365.2-201ENST00000517972 253 ntBASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 AC009962.1-201ENST00000567327 3813 ntBASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 AC006206.1-201ENST00000544842 3387 ntBASIC5.18□□□□□ -1.58
KIAA1549Q9HCM3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 GTF2IP4-201ENST00000453092 2054 ntBASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 AL121977.1-201ENST00000401636 979 ntBASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 RNU4-64P-201ENST00000410795 131 ntBASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 KRT8P51-201ENST00000438938 274 ntBASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 AC008638.1-201ENST00000506035 866 ntBASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 AL445670.1-201ENST00000618889 801 ntBASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 MARK2P4-201ENST00000503381 2380 ntBASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 MFSD8-239ENST00000641590 2479 ntBASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KIAA1549Q9HCM3 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 U3.2-201ENST00000362981 210 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 RNA5SP326-201ENST00000363209 110 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 OR3A2-201ENST00000408891 1076 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 RN7SKP59-201ENST00000410520 314 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AC027308.1-201ENST00000517993 110 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AC016180.1-201ENST00000567945 403 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 CU639417.4-201ENST00000623928 207 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 CR1-205ENST00000367053 7469 ntTSL 5 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms