Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC112484.3-201ENST00000505910 329 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AC010486.3-201ENST00000511602 785 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AL356057.1-201ENST00000533798 831 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AC012414.2-201ENST00000559474 187 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AL135999.3-201ENST00000610501 812 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AC078883.4-201ENST00000623218 367 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AC111152.1-202ENST00000635848 339 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC02211-204ENST00000642024 1070 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 OR7E91P-202ENST00000642062 1198 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CDK5RAP1Q96SZ6 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CDK5RAP1Q96SZ6 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.65□□□□□ -1.35
CDK5RAP1Q96SZ6 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.65□□□□□ -1.35
CDK5RAP1Q96SZ6 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CDK5RAP1Q96SZ6 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.65□□□□□ -1.35
CDK5RAP1Q96SZ6 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CDK5RAP1Q96SZ6 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CDK5RAP1Q96SZ6 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CDK5RAP1Q96SZ6 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 MIPEPP2-201ENST00000422560 1819 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 RNA5SP333-201ENST00000363466 118 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 RNA5SP334-201ENST00000364825 118 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 RNU4-64P-201ENST00000410795 131 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 MTND4LP17-201ENST00000414607 293 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AC107081.1-201ENST00000414975 361 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 GSTA7P-201ENST00000438425 448 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 GTF2IP14-201ENST00000441415 586 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 RPSAP40-201ENST00000442343 891 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 CXCR2P1-202ENST00000443392 1074 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AC112492.1-201ENST00000449607 712 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 RSU1P1-201ENST00000453416 441 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 SNX18P26-201ENST00000458433 740 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 MARK2P8-201ENST00000476069 952 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 RN7SL326P-201ENST00000477493 296 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 OR9A1P-202ENST00000484361 945 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 RN7SL104P-201ENST00000498686 293 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AC073581.1-201ENST00000519036 575 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 OR4U1P-201ENST00000554958 912 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AC026826.3-201ENST00000561747 158 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 MTATP6P2-201ENST00000603319 678 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 MIR7159-201ENST00000620587 66 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AC012254.5-201ENST00000623573 478 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AC007683.2-201ENST00000624681 714 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AP000526.1-201ENST00000603308 1388 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 AC137056.2-201ENST00000624055 1958 ntBASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 247.5 ms