Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM5Q96HC4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM5Q96HC4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM5Q96HC4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PDLIM5Q96HC4 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM5Q96HC4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM5Q96HC4 AL158152.1-201ENST00000602652 1435 ntBASIC5.82□□□□□ -1.48
PDLIM5Q96HC4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM5Q96HC4 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.82□□□□□ -1.48
PDLIM5Q96HC4 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 SELENOWP1-201ENST00000322792 252 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 RN7SKP279-201ENST00000411383 298 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 PNKDP1-201ENST00000435914 430 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 BMS1P10-201ENST00000443754 1120 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC005077.1-201ENST00000449226 375 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 FRG2FP-204ENST00000453982 852 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 GEMIN2P1-201ENST00000454246 752 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 RPL9P15-201ENST00000491096 532 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 MIR2117-201ENST00000516780 80 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 IGKV3D-25-201ENST00000519599 235 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC090424.1-201ENST00000535243 736 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 DUX4L52-201ENST00000549363 777 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC023310.2-201ENST00000553844 547 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC090826.1-203ENST00000569235 490 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC138207.8-204ENST00000579588 527 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC125494.2-201ENST00000602431 657 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC005828.7-201ENST00000607331 556 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 CASC19-274ENST00000642018 970 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC015799.1-201ENST00000622996 3122 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC008627.1-201ENST00000517511 1704 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC140134.1-201ENST00000511830 3544 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AC007842.1-201ENST00000597336 2039 ntBASIC5.81□□□□□ -1.48
PDLIM5Q96HC4 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 MTCO1P7-201ENST00000419523 1542 ntBASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 RNA5SP279-201ENST00000365513 117 ntBASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 GCNT1P4-201ENST00000404096 329 ntBASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 AC016739.1-201ENST00000405359 345 ntBASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 CFL1P4-201ENST00000451536 498 ntBASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 SEPT14P1-201ENST00000458703 648 ntBASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 HSD3BP3-201ENST00000514706 994 ntBASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms