Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AL354766.1-201ENST00000423396 542 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 NDUFA5P1-201ENST00000433858 341 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 HMGB3P10-201ENST00000434734 572 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 ARL5AP3-201ENST00000439327 386 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 CXCR2P1-202ENST00000443392 1074 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 CUBNP2-201ENST00000443534 1139 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 OR2L9P-201ENST00000444456 913 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 CCRL1P1-201ENST00000449542 1053 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 HIGD1AP16-201ENST00000450986 258 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 RBMY2TP-201ENST00000451162 947 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 RARRES2P3-201ENST00000457739 473 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 ACA64.4-201ENST00000459070 127 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 RPL23AP40-201ENST00000487630 390 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC136777.2-201ENST00000522979 358 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC084851.2-201ENST00000530377 364 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC008147.3-201ENST00000548666 354 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC067805.1-201ENST00000559344 470 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC016839.1-201ENST00000578162 867 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 MIR4732-201ENST00000581873 76 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC010487.1-201ENST00000594408 1172 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC025857.2-201ENST00000602711 238 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 SNORA74.4-201ENST00000607595 199 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC026367.3-201ENST00000619032 590 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC015722.2-201ENST00000622210 551 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS33AQ96AX1 AC004158.1-201ENST00000564508 4319 ntBASIC5.78□□□□□ -1.48
VPS33AQ96AX1 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.77□□□□□ -1.48
VPS33AQ96AX1 CASC19-246ENST00000641625 1606 ntBASIC5.77□□□□□ -1.48
VPS33AQ96AX1 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 EIF3EP1-201ENST00000433978 1316 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 ARSFP1-201ENST00000398758 477 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 RN7SKP166-201ENST00000410812 305 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 GPN3P1-201ENST00000423883 535 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AC013403.1-201ENST00000436954 263 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 NPM1P23-201ENST00000440193 849 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 TXNP2-201ENST00000443918 295 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 RN7SL39P-201ENST00000462264 297 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 ST13P12-201ENST00000508958 1094 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms