Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ATG4AQ8WYN0 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.27□□□□□ -1.41
ATG4AQ8WYN0 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.27□□□□□ -1.41
ATG4AQ8WYN0 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
ATG4AQ8WYN0 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ATG4AQ8WYN0 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.27□□□□□ -1.41
ATG4AQ8WYN0 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.27□□□□□ -1.41
ATG4AQ8WYN0 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ATG4AQ8WYN0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.27□□□□□ -1.41
ATG4AQ8WYN0 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 SSXP3-201ENST00000442971 1300 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC005224.3-201ENST00000584683 2140 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 OR2W4P-201ENST00000406496 926 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 NPM1P25-201ENST00000429734 854 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 RPL12P16-201ENST00000431098 498 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 MTCYBP15-201ENST00000433123 1127 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 Z80107.1-201ENST00000436830 412 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 ELOCP3-201ENST00000439303 348 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 ACA64.4-201ENST00000459070 127 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC090543.1-201ENST00000492168 485 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 GTF2IP9-201ENST00000502460 301 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 CCDC11P1-201ENST00000503137 1162 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 RNU6-1102P-201ENST00000516149 96 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 RNA5SP434-201ENST00000516647 121 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC026407.1-201ENST00000518369 204 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 HMGN1P26-201ENST00000558737 303 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC005632.2-201ENST00000564271 828 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 MIR744-201ENST00000578242 98 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC007683.2-201ENST00000624681 714 ntBASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATG4AQ8WYN0 KYNUP3-201ENST00000574386 1341 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 PRELID1P1-201ENST00000403549 660 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 RPS15AP30-201ENST00000420976 390 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC021876.1-201ENST00000425959 359 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 MRPL50P1-201ENST00000431951 384 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 RPEP4-201ENST00000437636 602 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 OR3D1P-201ENST00000438288 955 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC007000.2-201ENST00000442564 487 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC234771.2-201ENST00000445718 597 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 RPS18P1-201ENST00000447840 458 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 RBMY2HP-201ENST00000457961 720 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms