Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RN7SL168P-201ENST00000463821 279 ntBASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 AL122020.1-201ENST00000472287 459 ntBASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 AC006539.1-201ENST00000481419 501 ntBASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 RN7SL193P-201ENST00000491708 276 ntBASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 GAPDHP71-201ENST00000511530 1003 ntBASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 AC090826.1-203ENST00000569235 490 ntBASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 AL133481.2-203ENST00000607558 139 ntBASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 OR11H2-202ENST00000641517 1085 ntBASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 FBXL21-201ENST00000297158 1305 ntBASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 KYNUP3-201ENST00000574386 1341 ntBASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AL359955.1-201ENST00000455242 3275 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AL354890.1-201ENST00000413730 346 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 BX284632.2-201ENST00000421091 399 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AL590399.2-201ENST00000427536 309 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 CRIP1P1-201ENST00000427567 185 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AC015983.1-201ENST00000441577 373 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AL512605.1-202ENST00000441919 381 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AL359955.2-201ENST00000445380 353 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 FRG2FP-204ENST00000453982 852 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 Z83838.1-202ENST00000456225 839 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AL157777.1-201ENST00000468100 304 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AC093719.1-201ENST00000480427 441 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 RNA5SP473-201ENST00000516402 125 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AC024405.1-201ENST00000532521 1042 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AC091078.2-201ENST00000557145 559 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AL449283.1-201ENST00000602631 3403 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AC020633.1-201ENST00000468439 2247 ntBASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC65Q8IXS2 MSL3P1-202ENST00000440028 1468 ntBASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AP004607.3-201ENST00000530354 3915 ntBASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 RN7SKP78-201ENST00000364711 318 ntBASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC65Q8IXS2 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms