Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RPL39P62891 AC078880.4-201ENST00000617627 1749 ntBASIC3.98□□□□□ -1.77
RPL39P62891 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC3.98□□□□□ -1.77
RPL39P62891 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC3.98□□□□□ -1.77
RPL39P62891 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPL39P62891 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC3.98□□□□□ -1.77
RPL39P62891 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC3.98□□□□□ -1.77
RPL39P62891 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC3.97□□□□□ -1.77
RPL39P62891 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC3.97□□□□□ -1.77
RPL39P62891 PHACTR2P1-201ENST00000605639 1414 ntBASIC3.97□□□□□ -1.77
RPL39P62891 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
RPL39P62891 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
RPL39P62891 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC3.97□□□□□ -1.77
RPL39P62891 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RPL39P62891 AC006206.1-201ENST00000544842 3387 ntBASIC3.97□□□□□ -1.77
RPL39P62891 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPL39P62891 AL080312.1-201ENST00000256654 824 ntBASIC3.97□□□□□ -1.77
RPL39P62891 SNORA64.3-201ENST00000365647 134 ntBASIC3.97□□□□□ -1.77
RPL39P62891 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
RPL39P62891 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC3.97□□□□□ -1.77
RPL39P62891 RPS14P4-201ENST00000415880 418 ntBASIC3.97□□□□□ -1.77
RPL39P62891 KIF4CP-201ENST00000422742 1279 ntBASIC3.97□□□□□ -1.77
RPL39P62891 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC3.97□□□□□ -1.77
RPL39P62891 HMGN2P27-201ENST00000427352 270 ntBASIC3.97□□□□□ -1.77
RPL39P62891 AC023141.3-201ENST00000436698 278 ntBASIC3.97□□□□□ -1.77
RPL39P62891 ARMC4P1-201ENST00000438905 707 ntBASIC3.97□□□□□ -1.77
RPL39P62891 AC073465.2-201ENST00000440938 498 ntBASIC3.97□□□□□ -1.77
RPL39P62891 AC092601.1-201ENST00000444526 383 ntBASIC3.97□□□□□ -1.77
RPL39P62891 AC234771.2-201ENST00000445718 597 ntBASIC3.97□□□□□ -1.77
RPL39P62891 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC3.97□□□□□ -1.77
RPL39P62891 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC3.97□□□□□ -1.77
RPL39P62891 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
RPL39P62891 PSAT1P4-201ENST00000466500 526 ntBASIC3.97□□□□□ -1.77
RPL39P62891 RN7SL267P-201ENST00000485107 261 ntBASIC3.97□□□□□ -1.77
RPL39P62891 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC3.97□□□□□ -1.77
RPL39P62891 AC134698.1-201ENST00000511619 643 ntBASIC3.97□□□□□ -1.77
RPL39P62891 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC3.97□□□□□ -1.77
RPL39P62891 SNORA70.11-201ENST00000515987 138 ntBASIC3.97□□□□□ -1.77
RPL39P62891 SNORA70.13-201ENST00000516116 138 ntBASIC3.97□□□□□ -1.77
RPL39P62891 SNORA74.1-201ENST00000516320 180 ntBASIC3.97□□□□□ -1.77
RPL39P62891 RNA5SP230-201ENST00000517039 122 ntBASIC3.97□□□□□ -1.77
RPL39P62891 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC3.97□□□□□ -1.77
RPL39P62891 AC138832.1-201ENST00000522871 556 ntBASIC3.97□□□□□ -1.77
RPL39P62891 AC131935.1-201ENST00000524621 333 ntBASIC3.97□□□□□ -1.77
RPL39P62891 FAU-203ENST00000525297 355 ntTSL 5 BASIC3.97□□□□□ -1.77
RPL39P62891 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC3.97□□□□□ -1.77
RPL39P62891 AC079064.1-201ENST00000528365 362 ntBASIC3.97□□□□□ -1.77
RPL39P62891 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC3.97□□□□□ -1.77
RPL39P62891 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC3.97□□□□□ -1.77
RPL39P62891 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC3.97□□□□□ -1.77
RPL39P62891 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC3.97□□□□□ -1.77
RPL39P62891 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RPL39P62891 AGGF1P7-201ENST00000562369 913 ntBASIC3.97□□□□□ -1.77
RPL39P62891 MIR3157-201ENST00000578688 85 ntBASIC3.97□□□□□ -1.77
RPL39P62891 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC3.97□□□□□ -1.77
RPL39P62891 AL512430.4-201ENST00000603085 613 ntBASIC3.97□□□□□ -1.77
RPL39P62891 AC012368.3-201ENST00000604190 219 ntBASIC3.97□□□□□ -1.77
RPL39P62891 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC3.97□□□□□ -1.77
RPL39P62891 AL080312.2-201ENST00000613001 630 ntBASIC3.97□□□□□ -1.77
RPL39P62891 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC3.97□□□□□ -1.77
RPL39P62891 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC3.97□□□□□ -1.77
RPL39P62891 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC3.97□□□□□ -1.77
RPL39P62891 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
RPL39P62891 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
RPL39P62891 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RPL39P62891 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RPL39P62891 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RPL39P62891 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC3.97□□□□□ -1.77
RPL39P62891 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPL39P62891 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
RPL39P62891 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC3.97□□□□□ -1.77
RPL39P62891 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
RPL39P62891 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
RPL39P62891 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
RPL39P62891 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
RPL39P62891 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC3.96□□□□□ -1.77
RPL39P62891 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC3.96□□□□□ -1.77
RPL39P62891 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.77
RPL39P62891 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC3.96□□□□□ -1.78
RPL39P62891 AC092376.2-201ENST00000622621 4116 ntBASIC3.96□□□□□ -1.78
RPL39P62891 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RPL39P62891 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC3.96□□□□□ -1.78
RPL39P62891 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
RPL39P62891 U3.7-201ENST00000363668 216 ntBASIC3.96□□□□□ -1.78
RPL39P62891 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RPL39P62891 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
RPL39P62891 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RPL39P62891 ARSFP1-201ENST00000398758 477 ntBASIC3.96□□□□□ -1.78
RPL39P62891 CLCN3P1-201ENST00000423965 1017 ntBASIC3.96□□□□□ -1.78
RPL39P62891 VN1R20P-201ENST00000425215 966 ntBASIC3.96□□□□□ -1.78
RPL39P62891 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC3.96□□□□□ -1.78
RPL39P62891 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL39P62891 GAPDHP48-201ENST00000436626 961 ntBASIC3.96□□□□□ -1.78
RPL39P62891 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms