Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.65□□□□□ -1.5
VSX2P58304 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.65□□□□□ -1.5
VSX2P58304 GARSP1-201ENST00000570895 719 ntBASIC5.65□□□□□ -1.5
VSX2P58304 TXNP4-201ENST00000575018 310 ntBASIC5.65□□□□□ -1.5
VSX2P58304 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.65□□□□□ -1.5
VSX2P58304 AL049840.6-201ENST00000604583 345 ntBASIC5.65□□□□□ -1.5
VSX2P58304 AC100767.2-201ENST00000604840 693 ntBASIC5.65□□□□□ -1.5
VSX2P58304 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.65□□□□□ -1.5
VSX2P58304 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.65□□□□□ -1.5
VSX2P58304 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.65□□□□□ -1.5
VSX2P58304 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.65□□□□□ -1.51
VSX2P58304 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VSX2P58304 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VSX2P58304 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VSX2P58304 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VSX2P58304 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.65□□□□□ -1.51
VSX2P58304 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
VSX2P58304 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.65□□□□□ -1.51
VSX2P58304 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.65□□□□□ -1.51
VSX2P58304 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.65□□□□□ -1.51
VSX2P58304 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VSX2P58304 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
VSX2P58304 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VSX2P58304 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
VSX2P58304 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VSX2P58304 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
VSX2P58304 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VSX2P58304 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VSX2P58304 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
VSX2P58304 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VSX2P58304 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
VSX2P58304 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.64□□□□□ -1.51
VSX2P58304 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.64□□□□□ -1.51
VSX2P58304 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.64□□□□□ -1.51
VSX2P58304 AL663074.2-201ENST00000440621 479 ntBASIC5.64□□□□□ -1.51
VSX2P58304 AC009963.4-201ENST00000448535 339 ntBASIC5.64□□□□□ -1.51
VSX2P58304 AP006222.1-205ENST00000450734 457 ntBASIC5.64□□□□□ -1.51
VSX2P58304 AL355032.1-201ENST00000472981 438 ntBASIC5.64□□□□□ -1.51
VSX2P58304 PFN1P6-201ENST00000476786 399 ntBASIC5.64□□□□□ -1.51
VSX2P58304 UGT2A3P7-201ENST00000510485 734 ntBASIC5.64□□□□□ -1.51
VSX2P58304 GAPDHP71-201ENST00000511530 1003 ntBASIC5.64□□□□□ -1.51
VSX2P58304 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.64□□□□□ -1.51
VSX2P58304 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.64□□□□□ -1.51
VSX2P58304 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.64□□□□□ -1.51
VSX2P58304 OR7E158P-201ENST00000524483 910 ntBASIC5.64□□□□□ -1.51
VSX2P58304 OR4A42P-201ENST00000531397 938 ntBASIC5.64□□□□□ -1.51
VSX2P58304 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.64□□□□□ -1.51
VSX2P58304 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.64□□□□□ -1.51
VSX2P58304 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.64□□□□□ -1.51
VSX2P58304 AL356801.1-201ENST00000559320 294 ntBASIC5.64□□□□□ -1.51
VSX2P58304 AC083837.1-201ENST00000565297 2994 ntBASIC5.64□□□□□ -1.51
VSX2P58304 ZNF322P1-201ENST00000568013 1209 ntBASIC5.64□□□□□ -1.51
VSX2P58304 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.64□□□□□ -1.51
VSX2P58304 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.64□□□□□ -1.51
VSX2P58304 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.64□□□□□ -1.51
VSX2P58304 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.64□□□□□ -1.51
VSX2P58304 AL139099.4-201ENST00000614802 114 ntBASIC5.64□□□□□ -1.51
VSX2P58304 AC119674.1-217ENST00000641942 1086 ntBASIC5.64□□□□□ -1.51
VSX2P58304 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VSX2P58304 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VSX2P58304 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VSX2P58304 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VSX2P58304 NEPNP-201ENST00000404786 1371 ntBASIC5.64□□□□□ -1.51
VSX2P58304 PDZK1P1-202ENST00000425209 1350 ntBASIC5.64□□□□□ -1.51
VSX2P58304 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
VSX2P58304 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
VSX2P58304 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.64□□□□□ -1.51
VSX2P58304 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VSX2P58304 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VSX2P58304 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.63□□□□□ -1.51
VSX2P58304 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VSX2P58304 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VSX2P58304 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VSX2P58304 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VSX2P58304 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VSX2P58304 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.63□□□□□ -1.51
VSX2P58304 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
VSX2P58304 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VSX2P58304 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VSX2P58304 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VSX2P58304 OR52B3P-201ENST00000314715 928 ntBASIC5.63□□□□□ -1.51
VSX2P58304 RNU1-150P-201ENST00000362491 162 ntBASIC5.63□□□□□ -1.51
VSX2P58304 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VSX2P58304 MIR323B-201ENST00000385269 82 ntBASIC5.63□□□□□ -1.51
VSX2P58304 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VSX2P58304 AC245060.4-201ENST00000413293 1121 ntBASIC5.63□□□□□ -1.51
VSX2P58304 OR5W1P-201ENST00000423705 938 ntBASIC5.63□□□□□ -1.51
VSX2P58304 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.63□□□□□ -1.51
VSX2P58304 RPS29P14-201ENST00000431518 171 ntBASIC5.63□□□□□ -1.51
VSX2P58304 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.63□□□□□ -1.51
VSX2P58304 snoU13.29-201ENST00000459370 104 ntBASIC5.63□□□□□ -1.51
VSX2P58304 AC011476.1-201ENST00000466725 307 ntBASIC5.63□□□□□ -1.51
VSX2P58304 AC099521.1-201ENST00000482557 334 ntBASIC5.63□□□□□ -1.51
VSX2P58304 AL035690.1-201ENST00000490892 383 ntBASIC5.63□□□□□ -1.51
VSX2P58304 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.63□□□□□ -1.51
VSX2P58304 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.63□□□□□ -1.51
VSX2P58304 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.63□□□□□ -1.51
VSX2P58304 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.63□□□□□ -1.51
VSX2P58304 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
VSX2P58304 COX6CP7-201ENST00000597056 208 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms