Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC006530.1-201ENST00000555980 571 ntBASIC6.04□□□□□ -1.44
CDH6P55285 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH6P55285 AP001357.1-201ENST00000586304 1053 ntBASIC6.04□□□□□ -1.44
CDH6P55285 AC125494.2-201ENST00000602431 657 ntBASIC6.04□□□□□ -1.44
CDH6P55285 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.04□□□□□ -1.44
CDH6P55285 AC024884.1-201ENST00000620583 399 ntBASIC6.04□□□□□ -1.44
CDH6P55285 AC025262.3-201ENST00000623666 360 ntBASIC6.04□□□□□ -1.44
CDH6P55285 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH6P55285 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.04□□□□□ -1.44
CDH6P55285 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH6P55285 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH6P55285 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
CDH6P55285 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CDH6P55285 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH6P55285 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH6P55285 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH6P55285 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH6P55285 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
CDH6P55285 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH6P55285 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH6P55285 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH6P55285 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
CDH6P55285 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH6P55285 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH6P55285 AC107977.1-201ENST00000355745 939 ntBASIC6.03□□□□□ -1.44
CDH6P55285 RNA5SP91-201ENST00000390902 119 ntBASIC6.03□□□□□ -1.44
CDH6P55285 AC004386.1-201ENST00000393214 761 ntBASIC6.03□□□□□ -1.44
CDH6P55285 RPL11P3-201ENST00000395256 523 ntBASIC6.03□□□□□ -1.44
CDH6P55285 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH6P55285 RN7SKP17-201ENST00000411242 351 ntBASIC6.03□□□□□ -1.44
CDH6P55285 METTL15P3-201ENST00000415522 1221 ntBASIC6.03□□□□□ -1.44
CDH6P55285 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH6P55285 BX284632.2-201ENST00000421091 399 ntBASIC6.03□□□□□ -1.44
CDH6P55285 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH6P55285 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH6P55285 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH6P55285 SUMO2P8-201ENST00000434672 286 ntBASIC6.03□□□□□ -1.44
CDH6P55285 VN1R110P-201ENST00000438988 971 ntBASIC6.03□□□□□ -1.44
CDH6P55285 AL512605.1-202ENST00000441919 381 ntBASIC6.03□□□□□ -1.44
CDH6P55285 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.03□□□□□ -1.44
CDH6P55285 DNAJC19P5-201ENST00000443295 316 ntBASIC6.03□□□□□ -1.44
CDH6P55285 AL359955.2-201ENST00000445380 353 ntBASIC6.03□□□□□ -1.44
CDH6P55285 AL122020.1-201ENST00000472287 459 ntBASIC6.03□□□□□ -1.44
CDH6P55285 PDCL3P4-201ENST00000489621 720 ntBASIC6.03□□□□□ -1.44
CDH6P55285 RN7SL57P-201ENST00000493687 290 ntBASIC6.03□□□□□ -1.44
CDH6P55285 AC090058.1-201ENST00000498788 435 ntBASIC6.03□□□□□ -1.44
CDH6P55285 AC105384.2-201ENST00000508433 640 ntBASIC6.03□□□□□ -1.44
CDH6P55285 GAPDHP71-201ENST00000511530 1003 ntBASIC6.03□□□□□ -1.44
CDH6P55285 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.03□□□□□ -1.44
CDH6P55285 AC027369.2-201ENST00000528030 440 ntBASIC6.03□□□□□ -1.44
CDH6P55285 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH6P55285 PCNAP4-201ENST00000532690 730 ntBASIC6.03□□□□□ -1.44
CDH6P55285 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH6P55285 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.03□□□□□ -1.44
CDH6P55285 LINC00556-201ENST00000569603 412 ntBASIC6.03□□□□□ -1.44
CDH6P55285 MIR4433B-201ENST00000581329 102 ntBASIC6.03□□□□□ -1.44
CDH6P55285 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH6P55285 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.03□□□□□ -1.44
CDH6P55285 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.03□□□□□ -1.44
CDH6P55285 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.03□□□□□ -1.44
CDH6P55285 AL138960.1-201ENST00000613838 513 ntBASIC6.03□□□□□ -1.44
CDH6P55285 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH6P55285 AC129778.1-202ENST00000623812 261 ntBASIC6.03□□□□□ -1.44
CDH6P55285 AL591379.1-207ENST00000635982 261 ntBASIC6.03□□□□□ -1.44
CDH6P55285 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.03□□□□□ -1.44
CDH6P55285 AC000095.2-202ENST00000637415 154 ntBASIC6.03□□□□□ -1.44
CDH6P55285 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
CDH6P55285 AL442128.2-201ENST00000620246 1824 ntBASIC6.03□□□□□ -1.44
CDH6P55285 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH6P55285 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH6P55285 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH6P55285 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CDH6P55285 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH6P55285 AC138907.8-201ENST00000623981 2256 ntBASIC6.02□□□□□ -1.44
CDH6P55285 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.02□□□□□ -1.44
CDH6P55285 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CDH6P55285 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CDH6P55285 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH6P55285 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH6P55285 AL158152.1-201ENST00000602652 1435 ntBASIC6.02□□□□□ -1.45
CDH6P55285 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH6P55285 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH6P55285 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH6P55285 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH6P55285 U3.10-201ENST00000364459 214 ntBASIC6.02□□□□□ -1.45
CDH6P55285 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.02□□□□□ -1.45
CDH6P55285 RN7SKP29-201ENST00000410957 272 ntBASIC6.02□□□□□ -1.45
CDH6P55285 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.02□□□□□ -1.45
CDH6P55285 AC017078.1-201ENST00000416146 368 ntBASIC6.02□□□□□ -1.45
CDH6P55285 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.02□□□□□ -1.45
CDH6P55285 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH6P55285 AC025458.1-201ENST00000506046 166 ntBASIC6.02□□□□□ -1.45
CDH6P55285 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.02□□□□□ -1.45
CDH6P55285 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.02□□□□□ -1.45
CDH6P55285 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH6P55285 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH6P55285 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.02□□□□□ -1.45
CDH6P55285 RPL12P48-201ENST00000605620 304 ntBASIC6.02□□□□□ -1.45
CDH6P55285 AC093388.1-201ENST00000609166 430 ntBASIC6.02□□□□□ -1.45
CDH6P55285 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms