Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
MRE11P49959 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
MRE11P49959 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
MRE11P49959 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
MRE11P49959 AC010894.1-201ENST00000313760 361 ntBASIC7.31□□□□□ -1.24
MRE11P49959 RN7SKP77-201ENST00000363261 353 ntBASIC7.31□□□□□ -1.24
MRE11P49959 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC7.31□□□□□ -1.24
MRE11P49959 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.31□□□□□ -1.24
MRE11P49959 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
MRE11P49959 MRPS21P5-201ENST00000417885 231 ntBASIC7.31□□□□□ -1.24
MRE11P49959 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.31□□□□□ -1.24
MRE11P49959 IPPKP1-201ENST00000422501 768 ntBASIC7.31□□□□□ -1.24
MRE11P49959 KRT8P51-201ENST00000438938 274 ntBASIC7.31□□□□□ -1.24
MRE11P49959 GTF2IP14-201ENST00000441415 586 ntBASIC7.31□□□□□ -1.24
MRE11P49959 AC092106.1-201ENST00000444291 373 ntBASIC7.31□□□□□ -1.24
MRE11P49959 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.31□□□□□ -1.24
MRE11P49959 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
MRE11P49959 MYO5BP2-201ENST00000449815 1277 ntBASIC7.31□□□□□ -1.24
MRE11P49959 ZNF736P8Y-201ENST00000451913 669 ntBASIC7.31□□□□□ -1.24
MRE11P49959 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
MRE11P49959 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.31□□□□□ -1.24
MRE11P49959 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
MRE11P49959 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC7.31□□□□□ -1.24
MRE11P49959 COX6B1P4-201ENST00000519826 484 ntBASIC7.31□□□□□ -1.24
MRE11P49959 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.31□□□□□ -1.24
MRE11P49959 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.31□□□□□ -1.24
MRE11P49959 MTND1P24-201ENST00000552175 861 ntBASIC7.31□□□□□ -1.24
MRE11P49959 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.31□□□□□ -1.24
MRE11P49959 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC7.31□□□□□ -1.24
MRE11P49959 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.31□□□□□ -1.24
MRE11P49959 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC7.31□□□□□ -1.24
MRE11P49959 AC018690.1-201ENST00000608144 626 ntBASIC7.31□□□□□ -1.24
MRE11P49959 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.31□□□□□ -1.24
MRE11P49959 MRPL57P1-201ENST00000621486 265 ntBASIC7.31□□□□□ -1.24
MRE11P49959 AL137058.3-201ENST00000624531 3099 ntBASIC7.31□□□□□ -1.24
MRE11P49959 AL109659.3-201ENST00000624985 950 ntBASIC7.31□□□□□ -1.24
MRE11P49959 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC7.31□□□□□ -1.24
MRE11P49959 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.31□□□□□ -1.24
MRE11P49959 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.31□□□□□ -1.24
MRE11P49959 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
MRE11P49959 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
MRE11P49959 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
MRE11P49959 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
MRE11P49959 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
MRE11P49959 AC073429.2-201ENST00000569694 1444 ntBASIC7.3□□□□□ -1.24
MRE11P49959 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.3□□□□□ -1.24
MRE11P49959 AC016745.2-201ENST00000608834 3443 ntBASIC7.3□□□□□ -1.24
MRE11P49959 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.3□□□□□ -1.24
MRE11P49959 SNORD1C-201ENST00000363315 78 ntBASIC7.3□□□□□ -1.24
MRE11P49959 RNA5SP382-201ENST00000363355 112 ntBASIC7.3□□□□□ -1.24
MRE11P49959 RNA5SP152-201ENST00000365184 110 ntBASIC7.3□□□□□ -1.24
MRE11P49959 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
MRE11P49959 U3.23-201ENST00000391132 200 ntBASIC7.3□□□□□ -1.24
MRE11P49959 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
MRE11P49959 AL079341.1-201ENST00000404701 1207 ntBASIC7.3□□□□□ -1.24
MRE11P49959 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
MRE11P49959 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.3□□□□□ -1.24
MRE11P49959 VN1R37P-201ENST00000419096 748 ntBASIC7.3□□□□□ -1.24
MRE11P49959 CDC42P6-201ENST00000421246 576 ntBASIC7.3□□□□□ -1.24
MRE11P49959 SNRPEP5-201ENST00000425442 278 ntBASIC7.3□□□□□ -1.24
MRE11P49959 GAPDHP48-201ENST00000436626 961 ntBASIC7.3□□□□□ -1.24
MRE11P49959 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
MRE11P49959 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.3□□□□□ -1.24
MRE11P49959 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC7.3□□□□□ -1.24
MRE11P49959 AC090602.1-201ENST00000469695 252 ntBASIC7.3□□□□□ -1.24
MRE11P49959 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
MRE11P49959 GTF2IP9-201ENST00000502460 301 ntBASIC7.3□□□□□ -1.24
MRE11P49959 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.3□□□□□ -1.24
MRE11P49959 AC034244.2-201ENST00000514668 858 ntBASIC7.3□□□□□ -1.24
MRE11P49959 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC7.3□□□□□ -1.24
MRE11P49959 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.3□□□□□ -1.24
MRE11P49959 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
MRE11P49959 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.3□□□□□ -1.24
MRE11P49959 AL049840.5-201ENST00000602827 552 ntBASIC7.3□□□□□ -1.24
MRE11P49959 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC7.3□□□□□ -1.24
MRE11P49959 AC027334.1-201ENST00000603257 310 ntBASIC7.3□□□□□ -1.24
MRE11P49959 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.3□□□□□ -1.24
MRE11P49959 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.3□□□□□ -1.24
MRE11P49959 AC068057.2-201ENST00000624047 895 ntBASIC7.3□□□□□ -1.24
MRE11P49959 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.3□□□□□ -1.24
MRE11P49959 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.3□□□□□ -1.24
MRE11P49959 AC136428.4-201ENST00000634254 1155 ntBASIC7.3□□□□□ -1.24
MRE11P49959 AC024651.2-201ENST00000562480 2098 ntBASIC7.3□□□□□ -1.24
MRE11P49959 AC074141.1-201ENST00000588129 2995 ntBASIC7.3□□□□□ -1.24
MRE11P49959 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
MRE11P49959 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
MRE11P49959 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
MRE11P49959 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
MRE11P49959 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
MRE11P49959 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
MRE11P49959 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
MRE11P49959 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
MRE11P49959 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
MRE11P49959 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
MRE11P49959 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
MRE11P49959 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms