Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC015849.6-201ENST00000605454 474 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.16□□□□□ -1.58
CX3CR1P49238 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.16□□□□□ -1.58
CX3CR1P49238 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 uc_338.31-201ENST00000615595 186 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.16□□□□□ -1.58
CX3CR1P49238 AC073488.3-201ENST00000631611 778 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
CX3CR1P49238 AC079776.5-201ENST00000641920 211 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.16□□□□□ -1.58
CX3CR1P49238 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CX3CR1P49238 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 AC004076.2-201ENST00000620532 3323 ntBASIC5.16□□□□□ -1.58
CX3CR1P49238 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CX3CR1P49238 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.16□□□□□ -1.58
CX3CR1P49238 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CX3CR1P49238 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CX3CR1P49238 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.15□□□□□ -1.58
CX3CR1P49238 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CX3CR1P49238 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CX3CR1P49238 AC008627.1-201ENST00000517511 1704 ntBASIC5.15□□□□□ -1.58
CX3CR1P49238 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.15□□□□□ -1.58
CX3CR1P49238 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CX3CR1P49238 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.15□□□□□ -1.58
CX3CR1P49238 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.15□□□□□ -1.58
CX3CR1P49238 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
CX3CR1P49238 U3.10-201ENST00000364459 214 ntBASIC5.15□□□□□ -1.59
CX3CR1P49238 RN7SKP186-201ENST00000365371 303 ntBASIC5.15□□□□□ -1.59
CX3CR1P49238 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CX3CR1P49238 RBBP4P5-201ENST00000398583 1266 ntBASIC5.15□□□□□ -1.59
CX3CR1P49238 SMC4P1-201ENST00000414479 527 ntBASIC5.15□□□□□ -1.59
CX3CR1P49238 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.15□□□□□ -1.59
CX3CR1P49238 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.15□□□□□ -1.59
CX3CR1P49238 RPSAP65-201ENST00000429660 595 ntBASIC5.15□□□□□ -1.59
CX3CR1P49238 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.15□□□□□ -1.59
CX3CR1P49238 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CX3CR1P49238 AC098818.1-201ENST00000478593 252 ntBASIC5.15□□□□□ -1.59
CX3CR1P49238 RN7SL568P-201ENST00000493069 298 ntBASIC5.15□□□□□ -1.59
CX3CR1P49238 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.15□□□□□ -1.59
CX3CR1P49238 MIR2117-201ENST00000516780 80 ntBASIC5.15□□□□□ -1.59
CX3CR1P49238 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.15□□□□□ -1.59
CX3CR1P49238 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.15□□□□□ -1.59
CX3CR1P49238 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.15□□□□□ -1.59
CX3CR1P49238 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.15□□□□□ -1.59
CX3CR1P49238 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.15□□□□□ -1.59
CX3CR1P49238 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CX3CR1P49238 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.15□□□□□ -1.59
CX3CR1P49238 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.15□□□□□ -1.59
CX3CR1P49238 AC121758.1-202ENST00000556917 658 ntBASIC5.15□□□□□ -1.59
CX3CR1P49238 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.15□□□□□ -1.59
CX3CR1P49238 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.15□□□□□ -1.59
CX3CR1P49238 GARSP1-201ENST00000570895 719 ntBASIC5.15□□□□□ -1.59
CX3CR1P49238 TXNP4-201ENST00000575018 310 ntBASIC5.15□□□□□ -1.59
CX3CR1P49238 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.15□□□□□ -1.59
CX3CR1P49238 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.15□□□□□ -1.59
CX3CR1P49238 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CX3CR1P49238 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.15□□□□□ -1.59
CX3CR1P49238 AL022394.1-201ENST00000606979 292 ntBASIC5.15□□□□□ -1.59
CX3CR1P49238 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.15□□□□□ -1.59
CX3CR1P49238 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CX3CR1P49238 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CX3CR1P49238 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CX3CR1P49238 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CX3CR1P49238 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.15□□□□□ -1.59
CX3CR1P49238 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CX3CR1P49238 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CX3CR1P49238 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CX3CR1P49238 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CX3CR1P49238 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CX3CR1P49238 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.15□□□□□ -1.59
CX3CR1P49238 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.14□□□□□ -1.59
CX3CR1P49238 RBPJP7-201ENST00000442803 1447 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 RBPJP5-201ENST00000449433 1447 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 AL158152.1-201ENST00000602652 1435 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CR1P49238 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CR1P49238 AL031595.2-201ENST00000624215 19071 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CX3CR1P49238 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CR1P49238 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CR1P49238 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CR1P49238 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CR1P49238 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CR1P49238 AL359885.1-201ENST00000415786 903 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.14□□□□□ -1.59
CX3CR1P49238 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.14□□□□□ -1.59
CX3CR1P49238 RPS4XP5-201ENST00000419038 768 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CR1P49238 AC073476.1-201ENST00000452854 407 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 FRG2FP-204ENST00000453982 852 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 RNU1-88P-201ENST00000459274 128 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 AC092865.4-201ENST00000477936 615 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CR1P49238 PRMT5P1-201ENST00000514351 598 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms