Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX2P48431 AC005034.4-201ENST00000603612 899 ntBASIC5.5□□□□□ -1.53
SOX2P48431 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX2P48431 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX2P48431 AC005021.1-201ENST00000608730 355 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AC006924.1-201ENST00000610750 559 ntBASIC5.5□□□□□ -1.53
SOX2P48431 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.5□□□□□ -1.53
SOX2P48431 MIR6726-201ENST00000613751 61 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AC021422.1-201ENST00000621212 473 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AC015722.2-201ENST00000622210 551 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AC003992.1-201ENST00000635364 557 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.5□□□□□ -1.53
SOX2P48431 OR7E91P-202ENST00000642062 1198 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AC140479.2-201ENST00000421567 3130 ntBASIC5.5□□□□□ -1.53
SOX2P48431 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX2P48431 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SOX2P48431 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SOX2P48431 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SOX2P48431 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
SOX2P48431 AC015799.1-201ENST00000622996 3122 ntBASIC5.5□□□□□ -1.53
SOX2P48431 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SOX2P48431 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 DLD-205ENST00000440410 1993 ntTSL 2 BASIC5.49□□□□□ -1.53
SOX2P48431 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.49□□□□□ -1.53
SOX2P48431 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.49□□□□□ -1.53
SOX2P48431 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SOX2P48431 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.49□□□□□ -1.53
SOX2P48431 AC004656.1-201ENST00000568479 4951 ntBASIC5.49□□□□□ -1.53
SOX2P48431 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SOX2P48431 SNORD16-201ENST00000362803 99 ntBASIC5.49□□□□□ -1.53
SOX2P48431 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 GNG5P2-201ENST00000372054 207 ntBASIC5.49□□□□□ -1.53
SOX2P48431 RNU6-354P-201ENST00000383862 107 ntBASIC5.49□□□□□ -1.53
SOX2P48431 RNU6-610P-201ENST00000384264 107 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AF228730.1-201ENST00000397972 663 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AL445238.1-204ENST00000400311 463 ntBASIC5.49□□□□□ -1.53
SOX2P48431 RPL10P10-201ENST00000403509 664 ntBASIC5.49□□□□□ -1.53
SOX2P48431 RPL12P23-201ENST00000405880 490 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AL451061.1-201ENST00000407887 862 ntBASIC5.49□□□□□ -1.53
SOX2P48431 RN7SKP151-201ENST00000410230 316 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.49□□□□□ -1.53
SOX2P48431 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 AC241520.1-201ENST00000422654 1099 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX2P48431 PTP4A1P7-201ENST00000423476 514 ntBASIC5.49□□□□□ -1.53
SOX2P48431 VN1R42P-201ENST00000424651 344 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AC092447.3-201ENST00000426027 686 ntBASIC5.49□□□□□ -1.53
SOX2P48431 BX119321.1-201ENST00000428912 797 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX2P48431 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX2P48431 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.49□□□□□ -1.53
SOX2P48431 MTCYBP21-201ENST00000443300 1113 ntBASIC5.49□□□□□ -1.53
SOX2P48431 RPL6P30-201ENST00000443382 862 ntBASIC5.49□□□□□ -1.53
SOX2P48431 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX2P48431 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.49□□□□□ -1.53
SOX2P48431 AC112187.1-201ENST00000455837 479 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX2P48431 AC020898.1-201ENST00000474167 787 ntBASIC5.49□□□□□ -1.53
SOX2P48431 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
SOX2P48431 RPS3AP15-201ENST00000483874 781 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AC114728.1-201ENST00000488289 483 ntBASIC5.49□□□□□ -1.53
SOX2P48431 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.49□□□□□ -1.53
SOX2P48431 AC105233.1-201ENST00000498840 781 ntBASIC5.49□□□□□ -1.53
SOX2P48431 OR5H3P-201ENST00000502817 919 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.49□□□□□ -1.53
SOX2P48431 AC114940.1-201ENST00000512162 1265 ntBASIC5.49□□□□□ -1.53
SOX2P48431 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 RN7SKP196-201ENST00000516267 345 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.49□□□□□ -1.53
SOX2P48431 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.49□□□□□ -1.53
SOX2P48431 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX2P48431 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX2P48431 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX2P48431 AL121839.1-201ENST00000556233 1185 ntBASIC5.49□□□□□ -1.53
SOX2P48431 TPRX1P1-201ENST00000557620 319 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AC026956.1-201ENST00000558741 396 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX2P48431 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.49□□□□□ -1.53
SOX2P48431 AC092718.4-201ENST00000566639 716 ntBASIC5.49□□□□□ -1.53
SOX2P48431 GLYATL1P2-202ENST00000588046 902 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX2P48431 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.49□□□□□ -1.53
SOX2P48431 AL049829.3-202ENST00000604278 711 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX2P48431 AL512427.1-201ENST00000618593 349 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AC069234.4-201ENST00000621276 412 ntBASIC5.49□□□□□ -1.53
SOX2P48431 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX2P48431 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms