Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
NEDD4P46934 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.78□□□□□ -1.32
NEDD4P46934 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.78□□□□□ -1.32
NEDD4P46934 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NEDD4P46934 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.78□□□□□ -1.32
NEDD4P46934 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NEDD4P46934 AC138907.8-201ENST00000623981 2256 ntBASIC6.78□□□□□ -1.32
NEDD4P46934 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NEDD4P46934 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NEDD4P46934 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
NEDD4P46934 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.78□□□□□ -1.32
NEDD4P46934 MAPK10-261ENST00000641050 3109 ntBASIC6.78□□□□□ -1.32
NEDD4P46934 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.78□□□□□ -1.32
NEDD4P46934 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
NEDD4P46934 CDY17P-201ENST00000414121 1282 ntBASIC6.77□□□□□ -1.32
NEDD4P46934 NENFP1-201ENST00000419476 466 ntBASIC6.77□□□□□ -1.32
NEDD4P46934 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.77□□□□□ -1.32
NEDD4P46934 BX119321.1-201ENST00000428912 797 ntBASIC6.77□□□□□ -1.32
NEDD4P46934 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.77□□□□□ -1.32
NEDD4P46934 RPL12P11-201ENST00000439970 501 ntBASIC6.77□□□□□ -1.32
NEDD4P46934 UBE2V2P4-201ENST00000447495 259 ntBASIC6.77□□□□□ -1.32
NEDD4P46934 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.77□□□□□ -1.32
NEDD4P46934 AL358876.1-201ENST00000453364 1075 ntBASIC6.77□□□□□ -1.32
NEDD4P46934 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
NEDD4P46934 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.77□□□□□ -1.32
NEDD4P46934 AC021678.3-201ENST00000517893 476 ntBASIC6.77□□□□□ -1.32
NEDD4P46934 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.77□□□□□ -1.32
NEDD4P46934 HMGB1P42-201ENST00000532126 553 ntBASIC6.77□□□□□ -1.32
NEDD4P46934 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.77□□□□□ -1.32
NEDD4P46934 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.77□□□□□ -1.32
NEDD4P46934 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.77□□□□□ -1.32
NEDD4P46934 AC135626.1-201ENST00000556983 435 ntBASIC6.77□□□□□ -1.32
NEDD4P46934 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.77□□□□□ -1.32
NEDD4P46934 AC103703.1-201ENST00000634783 663 ntBASIC6.77□□□□□ -1.32
NEDD4P46934 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.77□□□□□ -1.32
NEDD4P46934 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
NEDD4P46934 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NEDD4P46934 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
NEDD4P46934 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.77□□□□□ -1.33
NEDD4P46934 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
NEDD4P46934 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NEDD4P46934 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
NEDD4P46934 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NEDD4P46934 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
NEDD4P46934 AC117409.1-201ENST00000470499 1310 ntBASIC6.77□□□□□ -1.33
NEDD4P46934 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NEDD4P46934 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NEDD4P46934 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NEDD4P46934 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.77□□□□□ -1.33
NEDD4P46934 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NEDD4P46934 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NEDD4P46934 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NEDD4P46934 RNA5SP30-201ENST00000365552 115 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 EEF1B2P8-201ENST00000414101 671 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 CRIP1P1-201ENST00000427567 185 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NEDD4P46934 AC027544.3-201ENST00000535082 757 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.76□□□□□ -1.33
NEDD4P46934 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.76□□□□□ -1.33
NEDD4P46934 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.76□□□□□ -1.33
NEDD4P46934 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.76□□□□□ -1.33
NEDD4P46934 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.76□□□□□ -1.33
NEDD4P46934 MIR4260-201ENST00000583107 67 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NEDD4P46934 AL513327.3-201ENST00000602618 469 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.76□□□□□ -1.33
NEDD4P46934 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.76□□□□□ -1.33
NEDD4P46934 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.76□□□□□ -1.33
NEDD4P46934 MIR193BHG-214ENST00000641765 509 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.76□□□□□ -1.33
NEDD4P46934 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NEDD4P46934 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NEDD4P46934 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
NEDD4P46934 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.76□□□□□ -1.33
NEDD4P46934 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NEDD4P46934 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NEDD4P46934 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.76□□□□□ -1.33
NEDD4P46934 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.76□□□□□ -1.33
NEDD4P46934 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NEDD4P46934 AC093297.3-201ENST00000607056 2517 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 RPS2P45-201ENST00000469997 2057 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NEDD4P46934 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NEDD4P46934 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
NEDD4P46934 SRRM1P3-201ENST00000426911 2678 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NEDD4P46934 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NEDD4P46934 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.76□□□□□ -1.33
NEDD4P46934 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
NEDD4P46934 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
NEDD4P46934 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.76□□□□□ -1.33
NEDD4P46934 AL662874.1-201ENST00000426065 230 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 AC104843.2-201ENST00000427666 297 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 AL022331.1-201ENST00000429025 477 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.76□□□□□ -1.33
NEDD4P46934 AP000281.1-201ENST00000444036 316 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 RPL36AP39-201ENST00000445859 318 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 HMGN1P36-201ENST00000446623 298 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 RPS3AP15-201ENST00000483874 781 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms