Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.48□□□□□ -1.53
RFC3P40938 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RFC3P40938 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RFC3P40938 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
RFC3P40938 AC119674.1-213ENST00000641177 1386 ntBASIC5.48□□□□□ -1.53
RFC3P40938 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 SNORD8-201ENST00000363915 110 ntBASIC5.48□□□□□ -1.53
RFC3P40938 RNU105B-201ENST00000364478 208 ntBASIC5.48□□□□□ -1.53
RFC3P40938 RN7SKP81-201ENST00000365603 331 ntBASIC5.48□□□□□ -1.53
RFC3P40938 AC245060.4-201ENST00000413293 1121 ntBASIC5.48□□□□□ -1.53
RFC3P40938 DPPA2P2-201ENST00000418220 897 ntBASIC5.48□□□□□ -1.53
RFC3P40938 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.48□□□□□ -1.53
RFC3P40938 RPS17P17-201ENST00000419392 409 ntBASIC5.48□□□□□ -1.53
RFC3P40938 BX284632.2-201ENST00000421091 399 ntBASIC5.48□□□□□ -1.53
RFC3P40938 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 MTND6P12-201ENST00000428247 522 ntBASIC5.48□□□□□ -1.53
RFC3P40938 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.48□□□□□ -1.53
RFC3P40938 AL512605.1-202ENST00000441919 381 ntBASIC5.48□□□□□ -1.53
RFC3P40938 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 AL359955.2-201ENST00000445380 353 ntBASIC5.48□□□□□ -1.53
RFC3P40938 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.48□□□□□ -1.53
RFC3P40938 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.48□□□□□ -1.53
RFC3P40938 AC011476.1-201ENST00000466725 307 ntBASIC5.48□□□□□ -1.53
RFC3P40938 RN7SL174P-201ENST00000475578 289 ntBASIC5.48□□□□□ -1.53
RFC3P40938 AC092865.4-201ENST00000477936 615 ntBASIC5.48□□□□□ -1.53
RFC3P40938 AC012123.2-201ENST00000485809 248 ntBASIC5.48□□□□□ -1.53
RFC3P40938 PPIAP19-201ENST00000486414 492 ntBASIC5.48□□□□□ -1.53
RFC3P40938 AC083795.1-201ENST00000491760 320 ntBASIC5.48□□□□□ -1.53
RFC3P40938 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RFC3P40938 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.48□□□□□ -1.53
RFC3P40938 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.48□□□□□ -1.53
RFC3P40938 AC002069.2-201ENST00000603580 883 ntBASIC5.48□□□□□ -1.53
RFC3P40938 RNA5SP439-201ENST00000617595 124 ntBASIC5.48□□□□□ -1.53
RFC3P40938 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 AOX3P-204ENST00000491025 2107 ntBASIC5.48□□□□□ -1.53
RFC3P40938 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.48□□□□□ -1.53
RFC3P40938 AP005435.3-201ENST00000531260 3198 ntBASIC5.48□□□□□ -1.53
RFC3P40938 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RFC3P40938 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.48□□□□□ -1.53
RFC3P40938 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.48□□□□□ -1.53
RFC3P40938 RBPJP7-201ENST00000442803 1447 ntBASIC5.48□□□□□ -1.53
RFC3P40938 RBPJP5-201ENST00000449433 1447 ntBASIC5.48□□□□□ -1.53
RFC3P40938 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.48□□□□□ -1.53
RFC3P40938 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.47□□□□□ -1.53
RFC3P40938 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.47□□□□□ -1.53
RFC3P40938 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 RNF19BPY-201ENST00000458209 1550 ntBASIC5.47□□□□□ -1.53
RFC3P40938 AP001284.1-201ENST00000528393 2118 ntBASIC5.47□□□□□ -1.53
RFC3P40938 PARP4P2-201ENST00000446672 3326 ntBASIC5.47□□□□□ -1.53
RFC3P40938 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.47□□□□□ -1.53
RFC3P40938 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RFC3P40938 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 SNORA17A-201ENST00000391185 133 ntBASIC5.47□□□□□ -1.53
RFC3P40938 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.47□□□□□ -1.53
RFC3P40938 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.47□□□□□ -1.53
RFC3P40938 RN7SKP161-201ENST00000411110 305 ntBASIC5.47□□□□□ -1.53
RFC3P40938 RPL35AP3-201ENST00000414680 288 ntBASIC5.47□□□□□ -1.53
RFC3P40938 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.47□□□□□ -1.53
RFC3P40938 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.47□□□□□ -1.53
RFC3P40938 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.47□□□□□ -1.53
RFC3P40938 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.47□□□□□ -1.53
RFC3P40938 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.47□□□□□ -1.53
RFC3P40938 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RFC3P40938 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.47□□□□□ -1.53
RFC3P40938 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.47□□□□□ -1.53
RFC3P40938 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.47□□□□□ -1.53
RFC3P40938 SLC25A51P1-201ENST00000468432 871 ntBASIC5.47□□□□□ -1.53
RFC3P40938 AC114728.1-201ENST00000488289 483 ntBASIC5.47□□□□□ -1.53
RFC3P40938 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.47□□□□□ -1.53
RFC3P40938 AC112191.2-201ENST00000522428 333 ntBASIC5.47□□□□□ -1.53
RFC3P40938 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.47□□□□□ -1.53
RFC3P40938 PCNAP4-201ENST00000532690 730 ntBASIC5.47□□□□□ -1.53
RFC3P40938 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.47□□□□□ -1.53
RFC3P40938 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.47□□□□□ -1.53
RFC3P40938 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.47□□□□□ -1.53
RFC3P40938 RPL12P48-201ENST00000605620 304 ntBASIC5.47□□□□□ -1.53
RFC3P40938 AC024589.2-201ENST00000605642 1294 ntBASIC5.47□□□□□ -1.53
RFC3P40938 AL357153.4-201ENST00000620487 1016 ntBASIC5.47□□□□□ -1.53
RFC3P40938 AC069542.2-201ENST00000624816 216 ntBASIC5.47□□□□□ -1.53
RFC3P40938 SNORA17.5-201ENST00000630429 132 ntBASIC5.47□□□□□ -1.53
RFC3P40938 AL359091.1-201ENST00000449048 1734 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms