Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMBP28068 RN7SKP240-201ENST00000410583 375 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 RPL12P12-201ENST00000424633 501 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 AC110602.1-201ENST00000437414 318 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 RPL6P30-201ENST00000443382 862 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 RPL12P39-201ENST00000455456 496 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 AL603882.1-201ENST00000463059 681 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMBP28068 RPL38P3-201ENST00000484463 213 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 snoU109.5-201ENST00000516231 132 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 AC009879.1-201ENST00000520029 839 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 AC078899.1-201ENST00000521432 1185 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 AC090424.1-201ENST00000535243 736 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 OOSP1P2-201ENST00000579644 351 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMBP28068 FAM27E2-201ENST00000619668 403 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 AL357562.1-201ENST00000624911 609 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMBP28068 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMBP28068 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMBP28068 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 AC004076.2-201ENST00000620532 3323 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 U3.10-201ENST00000364459 214 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 AL354766.1-201ENST00000423396 542 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 BX119904.3-201ENST00000428194 957 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 RPSAP65-201ENST00000429660 595 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 HSPE1P27-201ENST00000430808 296 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 AC023141.3-201ENST00000436698 278 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 RPS12P17-201ENST00000438591 377 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 KRT8P51-201ENST00000438938 274 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 AL663074.2-201ENST00000440621 479 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 SEPT14P12-201ENST00000442280 560 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 RPS10P18-201ENST00000442662 495 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 FTLP8-201ENST00000446770 267 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 AC068228.1-201ENST00000461723 211 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 PFN1P6-201ENST00000476786 399 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 AC093719.1-201ENST00000480427 441 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 ASNSP4-201ENST00000511103 447 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 AC007346.2-201ENST00000564816 892 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 AC010487.1-201ENST00000594408 1172 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 AC073389.3-201ENST00000609434 935 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 AL080312.2-201ENST00000613001 630 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 AC241377.1-201ENST00000619797 406 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 AL359742.1-201ENST00000622497 540 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms