Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.9□□□□□ -1.14
VARSP26640 RNU6-1225P-201ENST00000516336 65 ntBASIC7.9□□□□□ -1.14
VARSP26640 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
VARSP26640 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC7.9□□□□□ -1.14
VARSP26640 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.9□□□□□ -1.14
VARSP26640 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC7.9□□□□□ -1.14
VARSP26640 NACA-211ENST00000548563 827 ntTSL 5 BASIC7.9□□□□□ -1.14
VARSP26640 AC137768.1-201ENST00000549998 553 ntBASIC7.9□□□□□ -1.14
VARSP26640 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC7.9□□□□□ -1.14
VARSP26640 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC7.9□□□□□ -1.14
VARSP26640 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC7.9□□□□□ -1.14
VARSP26640 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.9□□□□□ -1.14
VARSP26640 AC006967.3-201ENST00000594086 1093 ntBASIC7.9□□□□□ -1.14
VARSP26640 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC7.9□□□□□ -1.14
VARSP26640 VDAC1P5-201ENST00000603132 844 ntBASIC7.9□□□□□ -1.14
VARSP26640 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.9□□□□□ -1.14
VARSP26640 AC007363.1-201ENST00000604736 620 ntBASIC7.9□□□□□ -1.14
VARSP26640 AL133255.1-201ENST00000606374 441 ntBASIC7.9□□□□□ -1.14
VARSP26640 Z95327.3-201ENST00000610385 572 ntBASIC7.9□□□□□ -1.14
VARSP26640 AC131159.2-201ENST00000613236 702 ntBASIC7.9□□□□□ -1.14
VARSP26640 AC124319.3-201ENST00000616832 526 ntBASIC7.9□□□□□ -1.14
VARSP26640 AP000648.2-201ENST00000624182 404 ntBASIC7.9□□□□□ -1.14
VARSP26640 AC068880.5-201ENST00000624331 290 ntBASIC7.9□□□□□ -1.14
VARSP26640 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
VARSP26640 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
VARSP26640 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.15
VARSP26640 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.9□□□□□ -1.15
VARSP26640 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.9□□□□□ -1.15
VARSP26640 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.9□□□□□ -1.15
VARSP26640 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
VARSP26640 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
VARSP26640 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
VARSP26640 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
VARSP26640 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
VARSP26640 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC7.89□□□□□ -1.15
VARSP26640 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC7.89□□□□□ -1.15
VARSP26640 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.89□□□□□ -1.15
VARSP26640 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 AC012078.1-201ENST00000405035 1646 ntBASIC7.89□□□□□ -1.15
VARSP26640 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC7.89□□□□□ -1.15
VARSP26640 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.89□□□□□ -1.15
VARSP26640 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 WASF5P-205ENST00000428639 1455 ntBASIC7.89□□□□□ -1.15
VARSP26640 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 AL034417.4-202ENST00000642135 2236 ntBASIC7.89□□□□□ -1.15
VARSP26640 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
VARSP26640 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 RNU5E-5P-201ENST00000365379 116 ntBASIC7.89□□□□□ -1.15
VARSP26640 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 GZMB-203ENST00000382542 666 ntTSL 2 BASIC7.89□□□□□ -1.15
VARSP26640 Y_RNA.409-201ENST00000383990 98 ntBASIC7.89□□□□□ -1.15
VARSP26640 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
VARSP26640 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 RSU1P3-201ENST00000412878 835 ntBASIC7.89□□□□□ -1.15
VARSP26640 AMD1P2-201ENST00000412936 992 ntBASIC7.89□□□□□ -1.15
VARSP26640 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC7.89□□□□□ -1.15
VARSP26640 AL161631.1-201ENST00000417933 486 ntBASIC7.89□□□□□ -1.15
VARSP26640 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.89□□□□□ -1.15
VARSP26640 AL157884.1-201ENST00000424561 454 ntBASIC7.89□□□□□ -1.15
VARSP26640 RPS10P2-201ENST00000430953 494 ntBASIC7.89□□□□□ -1.15
VARSP26640 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC7.89□□□□□ -1.15
VARSP26640 UBE2FP3-201ENST00000436366 524 ntBASIC7.89□□□□□ -1.15
VARSP26640 RPL21P88-201ENST00000436649 436 ntBASIC7.89□□□□□ -1.15
VARSP26640 WDR82P1-201ENST00000439836 939 ntBASIC7.89□□□□□ -1.15
VARSP26640 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.89□□□□□ -1.15
VARSP26640 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 ARPC3P5-201ENST00000448802 534 ntBASIC7.89□□□□□ -1.15
VARSP26640 SNRPGP6-201ENST00000451124 220 ntBASIC7.89□□□□□ -1.15
VARSP26640 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.89□□□□□ -1.15
VARSP26640 RN7SL65P-201ENST00000485221 315 ntBASIC7.89□□□□□ -1.15
VARSP26640 SETP14-201ENST00000497538 873 ntBASIC7.89□□□□□ -1.15
VARSP26640 AC008629.2-201ENST00000503783 483 ntBASIC7.89□□□□□ -1.15
VARSP26640 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC7.89□□□□□ -1.15
VARSP26640 IGHVII-78-1-201ENST00000521105 269 ntBASIC7.89□□□□□ -1.15
VARSP26640 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC7.89□□□□□ -1.15
VARSP26640 AC009779.4-201ENST00000554248 611 ntBASIC7.89□□□□□ -1.15
VARSP26640 AL512360.1-201ENST00000555346 234 ntBASIC7.89□□□□□ -1.15
VARSP26640 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC7.89□□□□□ -1.15
VARSP26640 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.89□□□□□ -1.15
VARSP26640 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC7.89□□□□□ -1.15
VARSP26640 AC025678.1-201ENST00000567861 338 ntBASIC7.89□□□□□ -1.15
VARSP26640 BNIP3P8-201ENST00000597863 560 ntBASIC7.89□□□□□ -1.15
VARSP26640 AC087283.1-201ENST00000604029 1074 ntBASIC7.89□□□□□ -1.15
VARSP26640 MEMO1P5-201ENST00000604810 406 ntBASIC7.89□□□□□ -1.15
VARSP26640 AC010200.2-201ENST00000605098 235 ntBASIC7.89□□□□□ -1.15
VARSP26640 AC097641.3-201ENST00000613523 464 ntBASIC7.89□□□□□ -1.15
VARSP26640 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC7.89□□□□□ -1.15
VARSP26640 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.89□□□□□ -1.15
VARSP26640 AC024940.5-201ENST00000622889 474 ntBASIC7.89□□□□□ -1.15
VARSP26640 AC108724.2-201ENST00000634593 290 ntBASIC7.89□□□□□ -1.15
VARSP26640 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms