Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 UBE2D3P1-201ENST00000436669 444 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 PTGES3P1-201ENST00000439531 483 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 AC073648.4-201ENST00000442655 781 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.61□□□□□ -1.35
COL6A2P12110 RPL23AP28-201ENST00000448062 470 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 RPS6P2-201ENST00000454208 705 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 ATG12P2-201ENST00000456830 416 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 CST12P-201ENST00000457644 362 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.61□□□□□ -1.35
COL6A2P12110 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.61□□□□□ -1.35
COL6A2P12110 AC023245.1-201ENST00000468501 517 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 AC128716.1-201ENST00000475129 166 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 RPS4XP6-201ENST00000477670 797 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 RPS3AP22-201ENST00000488297 769 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 RN7SL518P-201ENST00000491887 280 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL6A2P12110 AC087373.1-201ENST00000524920 491 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 AC027369.2-201ENST00000528030 440 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 NDUFS5P6-201ENST00000529136 295 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.61□□□□□ -1.35
COL6A2P12110 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.61□□□□□ -1.35
COL6A2P12110 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.61□□□□□ -1.35
COL6A2P12110 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.61□□□□□ -1.35
COL6A2P12110 RN7SL657P-201ENST00000582431 293 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.61□□□□□ -1.35
COL6A2P12110 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.61□□□□□ -1.35
COL6A2P12110 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.61□□□□□ -1.35
COL6A2P12110 AC122710.3-201ENST00000606566 541 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.61□□□□□ -1.35
COL6A2P12110 AC022106.1-201ENST00000612834 766 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 AL392048.1-201ENST00000613946 534 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.61□□□□□ -1.35
COL6A2P12110 AC015722.2-201ENST00000622210 551 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.61□□□□□ -1.35
COL6A2P12110 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.61□□□□□ -1.35
COL6A2P12110 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
COL6A2P12110 ZNF806-201ENST00000438300 1774 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 HSPD1P7-201ENST00000447985 1686 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 CASC19-228ENST00000641414 1684 ntBASIC6.61□□□□□ -1.35
COL6A2P12110 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
COL6A2P12110 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.61□□□□□ -1.35
COL6A2P12110 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL6A2P12110 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.61□□□□□ -1.35
COL6A2P12110 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.61□□□□□ -1.35
COL6A2P12110 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL6A2P12110 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
COL6A2P12110 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL6A2P12110 MKI67P1-201ENST00000604297 1460 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.6□□□□□ -1.35
COL6A2P12110 AC104454.1-201ENST00000421341 1401 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.6□□□□□ -1.35
COL6A2P12110 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.6□□□□□ -1.35
COL6A2P12110 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL6A2P12110 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
COL6A2P12110 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL6A2P12110 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
COL6A2P12110 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL6A2P12110 AC092451.3-201ENST00000625067 1343 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.6□□□□□ -1.35
COL6A2P12110 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL6A2P12110 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL6A2P12110 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL6A2P12110 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL6A2P12110 RNU5A-2P-201ENST00000384337 116 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 AL023284.3-201ENST00000407767 334 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC6.6□□□□□ -1.35
COL6A2P12110 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL6A2P12110 TRGV6-201ENST00000417928 299 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.6□□□□□ -1.35
COL6A2P12110 CLIC4P3-201ENST00000422221 752 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 VN1R21P-201ENST00000426703 765 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 Z68868.1-201ENST00000429048 544 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 OSTCP2-201ENST00000437956 444 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 GSTA7P-201ENST00000438425 448 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 THAP5P1-201ENST00000439089 262 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.6□□□□□ -1.35
COL6A2P12110 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL6A2P12110 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.6□□□□□ -1.35
COL6A2P12110 NPM1P19-201ENST00000450070 712 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.6□□□□□ -1.35
COL6A2P12110 AC005517.1-201ENST00000452091 489 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 RN7SL654P-201ENST00000479178 292 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL6A2P12110 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.6□□□□□ -1.35
COL6A2P12110 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.6□□□□□ -1.35
COL6A2P12110 BTG1P1-201ENST00000540396 508 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.6□□□□□ -1.35
COL6A2P12110 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.6□□□□□ -1.35
COL6A2P12110 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.6□□□□□ -1.35
COL6A2P12110 MIR4789-201ENST00000577469 82 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 AP005136.1-201ENST00000579765 429 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL6A2P12110 NBR2-204ENST00000587322 63 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.6□□□□□ -1.35
COL6A2P12110 AC121247.2-201ENST00000604776 136 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 AC007349.4-201ENST00000608114 532 ntBASIC6.6□□□□□ -1.35
COL6A2P12110 AL359513.1-201ENST00000614364 557 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms