Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC172P0C7W6 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC172P0C7W6 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 ICE2P1-201ENST00000512800 1849 ntBASIC6.39□□□□□ -1.39
CCDC172P0C7W6 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AL078621.3-201ENST00000623707 2042 ntBASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AL034417.1-201ENST00000399343 800 ntBASIC6.39□□□□□ -1.39
CCDC172P0C7W6 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AC092865.3-201ENST00000425390 1026 ntBASIC6.39□□□□□ -1.39
CCDC172P0C7W6 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 PDCL3P4-201ENST00000489621 720 ntBASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 RNU2-45P-201ENST00000516068 187 ntBASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AL359219.2-201ENST00000555184 348 ntBASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AC060780.2-201ENST00000589047 198 ntBASIC6.39□□□□□ -1.39
CCDC172P0C7W6 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AL135999.3-201ENST00000610501 812 ntBASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 FAM27E2-201ENST00000619668 403 ntBASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AL357562.1-201ENST00000624911 609 ntBASIC6.39□□□□□ -1.39
CCDC172P0C7W6 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC172P0C7W6 AC119674.1-202ENST00000641333 1860 ntBASIC6.39□□□□□ -1.39
CCDC172P0C7W6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AL445213.1-201ENST00000412589 747 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 METTL15P3-201ENST00000415522 1221 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 HSPE1P16-201ENST00000426640 348 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 CRIP1P1-201ENST00000427567 185 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 LINC00328-2P-201ENST00000436585 219 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AC096775.1-201ENST00000437724 448 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AL663074.2-201ENST00000440621 479 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 RPL12P49-201ENST00000441100 121 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 RN7SL254P-201ENST00000460609 284 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AC023245.1-201ENST00000468501 517 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 RN7SL362P-201ENST00000494228 267 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 ST13P12-201ENST00000508958 1094 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 MAST4-IT1-201ENST00000514241 658 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 TMEM97P2-201ENST00000517841 403 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AC078899.1-201ENST00000521432 1185 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 OR7E158P-201ENST00000524483 910 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AC090424.1-201ENST00000535243 736 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AL390334.1-201ENST00000556395 450 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AL133481.2-203ENST00000607558 139 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 AC103703.1-201ENST00000634783 663 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 RBMY1HP-201ENST00000382759 1389 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 RBPJP7-201ENST00000442803 1447 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 RBPJP5-201ENST00000449433 1447 ntBASIC6.38□□□□□ -1.39
CCDC172P0C7W6 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
CCDC172P0C7W6 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 GVINP1-202ENST00000531871 7271 ntBASIC6.37□□□□□ -1.39
CCDC172P0C7W6 AC012254.3-201ENST00000591183 2117 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms