Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR4258-201ENST00000580920 91 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
CXCL1P09341 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 AL672167.1-204ENST00000641875 3017 ntBASIC4.43□□□□□ -1.7
CXCL1P09341 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.43□□□□□ -1.7
CXCL1P09341 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL1P09341 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.43□□□□□ -1.7
CXCL1P09341 AC009220.2-201ENST00000489759 1751 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL1P09341 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL1P09341 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.42□□□□□ -1.7
CXCL1P09341 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CXCL1P09341 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CXCL1P09341 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.42□□□□□ -1.7
CXCL1P09341 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.42□□□□□ -1.7
CXCL1P09341 AL022393.1-201ENST00000625142 1677 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.42□□□□□ -1.7
CXCL1P09341 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC4.42□□□□□ -1.7
CXCL1P09341 AC004817.4-201ENST00000602396 3625 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.42□□□□□ -1.7
CXCL1P09341 RNA5SP346-201ENST00000363541 121 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC4.42□□□□□ -1.7
CXCL1P09341 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CXCL1P09341 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC4.42□□□□□ -1.7
CXCL1P09341 RN7SKP286-201ENST00000410894 299 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 COX5BP7-201ENST00000414780 274 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL1P09341 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.42□□□□□ -1.7
CXCL1P09341 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.42□□□□□ -1.7
CXCL1P09341 RPS7P8-201ENST00000418311 581 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 OR6C64P-201ENST00000419708 825 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.42□□□□□ -1.7
CXCL1P09341 GPN3P1-201ENST00000423883 535 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CXCL1P09341 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.42□□□□□ -1.7
CXCL1P09341 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC4.42□□□□□ -1.7
CXCL1P09341 GAPDHP37-201ENST00000442317 968 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 RBPJP7-201ENST00000442803 1447 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 AL512593.1-201ENST00000444758 779 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.42□□□□□ -1.7
CXCL1P09341 HIGD1AP16-201ENST00000450986 258 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 SNORD125-201ENST00000459538 96 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 PFN1P6-201ENST00000476786 399 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 OR7E22P-201ENST00000478335 1035 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 RPS10P28-201ENST00000480396 498 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 RPS17P5-201ENST00000498293 408 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 AC021242.1-201ENST00000507315 2035 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 AC098976.1-201ENST00000513014 541 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 IGHVII-49-1-201ENST00000521760 224 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 OR56A7P-201ENST00000524865 941 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 CYCSP25-201ENST00000525280 316 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.42□□□□□ -1.7
CXCL1P09341 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CXCL1P09341 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.42□□□□□ -1.7
CXCL1P09341 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.42□□□□□ -1.7
CXCL1P09341 SETP1-201ENST00000556014 845 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.42□□□□□ -1.7
CXCL1P09341 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.42□□□□□ -1.7
CXCL1P09341 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.42□□□□□ -1.7
CXCL1P09341 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.42□□□□□ -1.7
CXCL1P09341 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.42□□□□□ -1.7
CXCL1P09341 PPIAP14-201ENST00000577627 496 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 AC233702.9-201ENST00000581528 203 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 MIR3187-201ENST00000583431 70 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.42□□□□□ -1.7
CXCL1P09341 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CXCL1P09341 AP003108.4-201ENST00000623917 878 ntBASIC4.42□□□□□ -1.7
CXCL1P09341 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.42□□□□□ -1.7
CXCL1P09341 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL1P09341 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.42□□□□□ -1.7
CXCL1P09341 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.42□□□□□ -1.7
CXCL1P09341 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL1P09341 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL1P09341 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CXCL1P09341 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.42□□□□□ -1.7
CXCL1P09341 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL1P09341 AC083843.3-201ENST00000623679 2186 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL1P09341 AF287957.1-201ENST00000607368 1595 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL1P09341 AC100778.3-201ENST00000580060 1750 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 RNA5SP308-201ENST00000362532 115 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL1P09341 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CXCL1P09341 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CXCL1P09341 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC4.41□□□□□ -1.7
CXCL1P09341 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC4.41□□□□□ -1.7
CXCL1P09341 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.41□□□□□ -1.7
CXCL1P09341 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.41□□□□□ -1.7
CXCL1P09341 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.41□□□□□ -1.7
CXCL1P09341 OR52U1P-201ENST00000439752 923 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 GTF2IP14-201ENST00000441415 586 ntBASIC4.41□□□□□ -1.7
CXCL1P09341 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms