Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RB1P06400 AC244453.4-201ENST00000419150 388 ntBASIC6.41□□□□□ -1.38
RB1P06400 AC092967.1-201ENST00000449016 481 ntBASIC6.41□□□□□ -1.38
RB1P06400 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.41□□□□□ -1.38
RB1P06400 MTCYBP14-201ENST00000457471 715 ntBASIC6.41□□□□□ -1.38
RB1P06400 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.41□□□□□ -1.38
RB1P06400 MTND3P6-201ENST00000485242 339 ntBASIC6.41□□□□□ -1.38
RB1P06400 IGHV1-14-201ENST00000523391 241 ntBASIC6.41□□□□□ -1.38
RB1P06400 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RB1P06400 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.41□□□□□ -1.38
RB1P06400 AC025423.2-201ENST00000537570 439 ntBASIC6.41□□□□□ -1.38
RB1P06400 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.41□□□□□ -1.38
RB1P06400 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.41□□□□□ -1.38
RB1P06400 AC023389.2-201ENST00000580031 955 ntBASIC6.41□□□□□ -1.38
RB1P06400 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.41□□□□□ -1.38
RB1P06400 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.41□□□□□ -1.38
RB1P06400 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.41□□□□□ -1.38
RB1P06400 AC020658.4-201ENST00000613987 684 ntBASIC6.41□□□□□ -1.38
RB1P06400 AC016769.4-201ENST00000616893 535 ntBASIC6.41□□□□□ -1.38
RB1P06400 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.41□□□□□ -1.38
RB1P06400 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.41□□□□□ -1.38
RB1P06400 CU639417.4-201ENST00000623928 207 ntBASIC6.41□□□□□ -1.38
RB1P06400 MTCO1P1-201ENST00000624263 1081 ntBASIC6.41□□□□□ -1.38
RB1P06400 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RB1P06400 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RB1P06400 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.41□□□□□ -1.38
RB1P06400 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.41□□□□□ -1.38
RB1P06400 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RB1P06400 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RB1P06400 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RB1P06400 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
RB1P06400 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RB1P06400 AC073429.2-201ENST00000569694 1444 ntBASIC6.41□□□□□ -1.38
RB1P06400 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.41□□□□□ -1.38
RB1P06400 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
RB1P06400 AP000547.3-204ENST00000588548 2523 ntBASIC6.4□□□□□ -1.38
RB1P06400 PABPC1P8-201ENST00000452851 2086 ntBASIC6.4□□□□□ -1.38
RB1P06400 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RB1P06400 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RB1P06400 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
RB1P06400 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RB1P06400 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RB1P06400 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RB1P06400 FAM32BP-201ENST00000344033 333 ntBASIC6.4□□□□□ -1.38
RB1P06400 RNA5SP375-201ENST00000362975 119 ntBASIC6.4□□□□□ -1.38
RB1P06400 RN7SKP124-201ENST00000364730 341 ntBASIC6.4□□□□□ -1.38
RB1P06400 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.4□□□□□ -1.38
RB1P06400 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
RB1P06400 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.4□□□□□ -1.38
RB1P06400 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.4□□□□□ -1.38
RB1P06400 AP000534.2-201ENST00000412729 568 ntBASIC6.4□□□□□ -1.38
RB1P06400 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.4□□□□□ -1.38
RB1P06400 CYP4F30P-202ENST00000420048 405 ntBASIC6.4□□□□□ -1.38
RB1P06400 AC007394.1-201ENST00000421941 531 ntBASIC6.4□□□□□ -1.38
RB1P06400 AC127526.2-201ENST00000426436 775 ntBASIC6.4□□□□□ -1.38
RB1P06400 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
RB1P06400 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.4□□□□□ -1.38
RB1P06400 RPS17P15-201ENST00000475609 349 ntBASIC6.4□□□□□ -1.38
RB1P06400 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RB1P06400 RNU6-943P-201ENST00000516960 98 ntBASIC6.4□□□□□ -1.38
RB1P06400 OR6M2P-201ENST00000529831 871 ntBASIC6.4□□□□□ -1.38
RB1P06400 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.4□□□□□ -1.38
RB1P06400 AC073916.1-201ENST00000545095 130 ntBASIC6.4□□□□□ -1.38
RB1P06400 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.4□□□□□ -1.38
RB1P06400 AL683813.2-201ENST00000605245 502 ntBASIC6.4□□□□□ -1.38
RB1P06400 AL021918.2-201ENST00000613415 194 ntBASIC6.4□□□□□ -1.38
RB1P06400 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.4□□□□□ -1.38
RB1P06400 AC007683.2-201ENST00000624681 714 ntBASIC6.4□□□□□ -1.38
RB1P06400 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.4□□□□□ -1.38
RB1P06400 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
RB1P06400 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.4□□□□□ -1.38
RB1P06400 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.4□□□□□ -1.39
RB1P06400 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RB1P06400 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RB1P06400 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.4□□□□□ -1.39
RB1P06400 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
RB1P06400 AL033543.1-201ENST00000623440 13454 ntBASIC6.4□□□□□ -1.39
RB1P06400 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
RB1P06400 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.4□□□□□ -1.39
RB1P06400 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RB1P06400 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.4□□□□□ -1.39
RB1P06400 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.4□□□□□ -1.39
RB1P06400 AL591848.4-201ENST00000567832 3472 ntBASIC6.4□□□□□ -1.39
RB1P06400 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
RB1P06400 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
RB1P06400 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.39□□□□□ -1.39
RB1P06400 WBP11P1-201ENST00000562560 1931 ntBASIC6.39□□□□□ -1.39
RB1P06400 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
RB1P06400 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
RB1P06400 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.39□□□□□ -1.39
RB1P06400 AL731556.1-201ENST00000394628 3711 ntBASIC6.39□□□□□ -1.39
RB1P06400 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RB1P06400 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RB1P06400 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
RB1P06400 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.39□□□□□ -1.39
RB1P06400 AL662874.1-201ENST00000426065 230 ntBASIC6.39□□□□□ -1.39
RB1P06400 NANOGP4-201ENST00000427230 913 ntBASIC6.39□□□□□ -1.39
RB1P06400 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.39□□□□□ -1.39
RB1P06400 GAPDHP58-201ENST00000438477 1006 ntBASIC6.39□□□□□ -1.39
RB1P06400 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms