Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL5A2P05997 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.47□□□□□ -1.21
COL5A2P05997 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
COL5A2P05997 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
COL5A2P05997 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL5A2P05997 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC7.47□□□□□ -1.21
COL5A2P05997 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.47□□□□□ -1.21
COL5A2P05997 HMGB1P32-201ENST00000425971 565 ntBASIC7.47□□□□□ -1.21
COL5A2P05997 DSTNP5-201ENST00000427921 523 ntBASIC7.47□□□□□ -1.21
COL5A2P05997 RPS18P6-201ENST00000476880 458 ntBASIC7.47□□□□□ -1.21
COL5A2P05997 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC7.47□□□□□ -1.21
COL5A2P05997 AL049779.3-201ENST00000557141 606 ntBASIC7.47□□□□□ -1.21
COL5A2P05997 FAM25E-202ENST00000608562 189 ntBASIC7.47□□□□□ -1.21
COL5A2P05997 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.47□□□□□ -1.21
COL5A2P05997 AC090527.3-201ENST00000619041 548 ntBASIC7.47□□□□□ -1.21
COL5A2P05997 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.47□□□□□ -1.21
COL5A2P05997 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.47□□□□□ -1.21
COL5A2P05997 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL5A2P05997 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.47□□□□□ -1.21
COL5A2P05997 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.47□□□□□ -1.21
COL5A2P05997 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.47□□□□□ -1.21
COL5A2P05997 HSPA8P18-201ENST00000439846 1928 ntBASIC7.47□□□□□ -1.21
COL5A2P05997 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL5A2P05997 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
COL5A2P05997 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.47□□□□□ -1.21
COL5A2P05997 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL5A2P05997 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
COL5A2P05997 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
COL5A2P05997 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.46□□□□□ -1.21
COL5A2P05997 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
COL5A2P05997 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
COL5A2P05997 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
COL5A2P05997 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.21
COL5A2P05997 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.22
COL5A2P05997 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL5A2P05997 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
COL5A2P05997 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
COL5A2P05997 U3.36-201ENST00000408418 213 ntBASIC7.46□□□□□ -1.22
COL5A2P05997 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.46□□□□□ -1.22
COL5A2P05997 RPL7P6-201ENST00000480903 738 ntBASIC7.46□□□□□ -1.22
COL5A2P05997 DUTP1-201ENST00000493631 470 ntBASIC7.46□□□□□ -1.22
COL5A2P05997 CR383656.6-201ENST00000550518 394 ntBASIC7.46□□□□□ -1.22
COL5A2P05997 DPPA3P2-202ENST00000557188 1219 ntBASIC7.46□□□□□ -1.22
COL5A2P05997 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC7.46□□□□□ -1.22
COL5A2P05997 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC7.46□□□□□ -1.22
COL5A2P05997 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.46□□□□□ -1.22
COL5A2P05997 AC011497.2-201ENST00000600255 639 ntBASIC7.46□□□□□ -1.22
COL5A2P05997 AC104785.1-201ENST00000603220 588 ntBASIC7.46□□□□□ -1.22
COL5A2P05997 AC091193.1-201ENST00000604640 448 ntBASIC7.46□□□□□ -1.22
COL5A2P05997 AC009163.6-201ENST00000612367 342 ntBASIC7.46□□□□□ -1.22
COL5A2P05997 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC7.46□□□□□ -1.22
COL5A2P05997 AP002799.1-201ENST00000623552 423 ntBASIC7.46□□□□□ -1.22
COL5A2P05997 AC130448.2-201ENST00000624082 374 ntBASIC7.46□□□□□ -1.22
COL5A2P05997 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL5A2P05997 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
COL5A2P05997 TMEM75-201ENST00000624314 2165 ntBASIC7.46□□□□□ -1.22
COL5A2P05997 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL5A2P05997 ABCA11P-202ENST00000504019 2110 ntBASIC7.46□□□□□ -1.22
COL5A2P05997 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL5A2P05997 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL5A2P05997 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
COL5A2P05997 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
COL5A2P05997 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
COL5A2P05997 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL5A2P05997 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC7.46□□□□□ -1.22
COL5A2P05997 AC110716.2-201ENST00000563865 3945 ntBASIC7.46□□□□□ -1.22
COL5A2P05997 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL5A2P05997 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL5A2P05997 AC011493.1-201ENST00000596753 1632 ntBASIC7.45□□□□□ -1.22
COL5A2P05997 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL5A2P05997 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.45□□□□□ -1.22
COL5A2P05997 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL5A2P05997 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
COL5A2P05997 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.45□□□□□ -1.22
COL5A2P05997 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
COL5A2P05997 AC016027.5-201ENST00000427227 210 ntBASIC7.45□□□□□ -1.22
COL5A2P05997 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.45□□□□□ -1.22
COL5A2P05997 DNAJB5P1-201ENST00000454004 806 ntBASIC7.45□□□□□ -1.22
COL5A2P05997 AC015864.1-201ENST00000496512 544 ntBASIC7.45□□□□□ -1.22
COL5A2P05997 SNRPCP2-201ENST00000504370 475 ntBASIC7.45□□□□□ -1.22
COL5A2P05997 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC7.45□□□□□ -1.22
COL5A2P05997 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC7.45□□□□□ -1.22
COL5A2P05997 WBP1LP8-201ENST00000617401 327 ntBASIC7.45□□□□□ -1.22
COL5A2P05997 WWOX-217ENST00000620008 450 ntTSL 2 BASIC7.45□□□□□ -1.22
COL5A2P05997 AC091953.3-201ENST00000623220 236 ntBASIC7.45□□□□□ -1.22
COL5A2P05997 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.45□□□□□ -1.22
COL5A2P05997 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7.45□□□□□ -1.22
COL5A2P05997 AP000550.3-201ENST00000637734 379 ntBASIC7.45□□□□□ -1.22
COL5A2P05997 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL5A2P05997 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL5A2P05997 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.45□□□□□ -1.22
COL5A2P05997 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.45□□□□□ -1.22
COL5A2P05997 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.45□□□□□ -1.22
COL5A2P05997 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL5A2P05997 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL5A2P05997 ZNF733P-202ENST00000444809 1573 ntBASIC7.45□□□□□ -1.22
COL5A2P05997 MFSD8-239ENST00000641590 2479 ntBASIC7.45□□□□□ -1.22
COL5A2P05997 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL5A2P05997 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL5A2P05997 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms