Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC8.74□□□□□ -1.01
RAPGEF3O95398 ZNF736P1Y-201ENST00000440402 1276 ntBASIC8.74□□□□□ -1.01
RAPGEF3O95398 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC8.74□□□□□ -1.01
RAPGEF3O95398 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC8.74□□□□□ -1.01
RAPGEF3O95398 AL133372.1-201ENST00000493565 745 ntBASIC8.74□□□□□ -1.01
RAPGEF3O95398 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC8.74□□□□□ -1.01
RAPGEF3O95398 AC025857.1-201ENST00000525252 377 ntBASIC8.74□□□□□ -1.01
RAPGEF3O95398 AC018552.1-201ENST00000562099 811 ntBASIC8.74□□□□□ -1.01
RAPGEF3O95398 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC8.74□□□□□ -1.01
RAPGEF3O95398 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC8.74□□□□□ -1.01
RAPGEF3O95398 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC8.74□□□□□ -1.01
RAPGEF3O95398 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC8.74□□□□□ -1.01
RAPGEF3O95398 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC8.74□□□□□ -1.01
RAPGEF3O95398 AC006116.3-201ENST00000592968 361 ntBASIC8.74□□□□□ -1.01
RAPGEF3O95398 AF230666.2-201ENST00000602328 725 ntBASIC8.74□□□□□ -1.01
RAPGEF3O95398 PPATP2-201ENST00000605635 508 ntBASIC8.74□□□□□ -1.01
RAPGEF3O95398 BNIP3P7-201ENST00000605641 516 ntBASIC8.74□□□□□ -1.01
RAPGEF3O95398 AC020923.1-201ENST00000624021 917 ntBASIC8.74□□□□□ -1.01
RAPGEF3O95398 AC080188.3-201ENST00000624842 748 ntBASIC8.74□□□□□ -1.01
RAPGEF3O95398 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RAPGEF3O95398 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC8.74□□□□□ -1.01
RAPGEF3O95398 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC8.74□□□□□ -1.01
RAPGEF3O95398 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC8.74□□□□□ -1.01
RAPGEF3O95398 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RAPGEF3O95398 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RAPGEF3O95398 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
RAPGEF3O95398 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC8.73□□□□□ -1.01
RAPGEF3O95398 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
RAPGEF3O95398 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
RAPGEF3O95398 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC8.73□□□□□ -1.01
RAPGEF3O95398 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC8.73□□□□□ -1.01
RAPGEF3O95398 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC8.73□□□□□ -1.01
RAPGEF3O95398 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC8.73□□□□□ -1.01
RAPGEF3O95398 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC8.73□□□□□ -1.01
RAPGEF3O95398 MTND2P3-201ENST00000452458 470 ntBASIC8.73□□□□□ -1.01
RAPGEF3O95398 AC105233.1-201ENST00000498840 781 ntBASIC8.73□□□□□ -1.01
RAPGEF3O95398 RPEP1-201ENST00000504507 658 ntBASIC8.73□□□□□ -1.01
RAPGEF3O95398 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC8.73□□□□□ -1.01
RAPGEF3O95398 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC8.73□□□□□ -1.01
RAPGEF3O95398 HSPE1P2-201ENST00000554777 306 ntBASIC8.73□□□□□ -1.01
RAPGEF3O95398 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC8.73□□□□□ -1.01
RAPGEF3O95398 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC8.73□□□□□ -1.01
RAPGEF3O95398 AC000068.2-201ENST00000608816 460 ntBASIC8.73□□□□□ -1.01
RAPGEF3O95398 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC8.73□□□□□ -1.01
RAPGEF3O95398 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RAPGEF3O95398 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RAPGEF3O95398 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RAPGEF3O95398 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RAPGEF3O95398 AC016583.1-201ENST00000624221 2431 ntBASIC8.73□□□□□ -1.01
RAPGEF3O95398 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.73□□□□□ -1.01
RAPGEF3O95398 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RAPGEF3O95398 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RAPGEF3O95398 EEF1A1P24-201ENST00000451469 1378 ntBASIC8.73□□□□□ -1.01
RAPGEF3O95398 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC8.73□□□□□ -1.01
RAPGEF3O95398 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RAPGEF3O95398 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RAPGEF3O95398 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 AC026951.1-201ENST00000559530 2459 ntBASIC8.72□□□□□ -1.01
RAPGEF3O95398 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
RAPGEF3O95398 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RAPGEF3O95398 AC105749.1-201ENST00000631338 2008 ntBASIC8.72□□□□□ -1.01
RAPGEF3O95398 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 BX119904.3-201ENST00000428194 957 ntBASIC8.72□□□□□ -1.01
RAPGEF3O95398 AC089999.1-201ENST00000460336 374 ntBASIC8.72□□□□□ -1.01
RAPGEF3O95398 IGLV2-34-201ENST00000490007 283 ntBASIC8.72□□□□□ -1.01
RAPGEF3O95398 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 RNU6-467P-201ENST00000517027 110 ntBASIC8.72□□□□□ -1.01
RAPGEF3O95398 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 AC137768.1-201ENST00000549998 553 ntBASIC8.72□□□□□ -1.01
RAPGEF3O95398 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 AP002799.1-201ENST00000623552 423 ntBASIC8.72□□□□□ -1.01
RAPGEF3O95398 AC104820.1-201ENST00000624183 307 ntBASIC8.72□□□□□ -1.01
RAPGEF3O95398 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RAPGEF3O95398 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RAPGEF3O95398 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RAPGEF3O95398 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 AC022417.1-201ENST00000624768 1303 ntBASIC8.72□□□□□ -1.01
RAPGEF3O95398 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
RAPGEF3O95398 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RAPGEF3O95398 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
RAPGEF3O95398 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC8.71□□□□□ -1.01
RAPGEF3O95398 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
RAPGEF3O95398 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
RAPGEF3O95398 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.71□□□□□ -1.01
RAPGEF3O95398 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RAPGEF3O95398 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.71□□□□□ -1.01
RAPGEF3O95398 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
RAPGEF3O95398 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
RAPGEF3O95398 AL360271.1-201ENST00000395679 510 ntBASIC8.71□□□□□ -1.02
RAPGEF3O95398 AL136116.2-201ENST00000404020 785 ntBASIC8.71□□□□□ -1.02
RAPGEF3O95398 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms