Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSSCA1O60232 U3.7-201ENST00000363668 216 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSSCA1O60232 MIR138-2-201ENST00000384916 84 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 AL117344.1-201ENST00000407196 616 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.61□□□□□ -1.67
SSSCA1O60232 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC4.61□□□□□ -1.67
SSSCA1O60232 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.61□□□□□ -1.67
SSSCA1O60232 AC019205.1-201ENST00000421830 730 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 HMGN2P27-201ENST00000427352 270 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 DEFA9P-201ENST00000433042 285 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 PCBP2P1-201ENST00000437262 977 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SSSCA1O60232 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.61□□□□□ -1.67
SSSCA1O60232 RPS10P18-201ENST00000442662 495 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 AL158214.1-201ENST00000444423 404 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.61□□□□□ -1.67
SSSCA1O60232 RPL31P11-202ENST00000454082 372 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 TAAR4P-201ENST00000454843 1039 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 PSAT1P4-201ENST00000466500 526 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 RPL12P24-201ENST00000474907 486 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSSCA1O60232 AC012123.2-201ENST00000485809 248 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 RPL12P30-201ENST00000488389 499 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSSCA1O60232 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.61□□□□□ -1.67
SSSCA1O60232 RNA5SP230-201ENST00000517039 122 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.61□□□□□ -1.67
SSSCA1O60232 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.61□□□□□ -1.67
SSSCA1O60232 AC122688.1-201ENST00000541494 223 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSSCA1O60232 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.61□□□□□ -1.67
SSSCA1O60232 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SSSCA1O60232 DHFRP1-201ENST00000579682 559 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.61□□□□□ -1.67
SSSCA1O60232 SMIM12P1-201ENST00000603004 274 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 AC145423.1-201ENST00000605712 336 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 AC023206.1-201ENST00000605824 298 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC4.61□□□□□ -1.67
SSSCA1O60232 AL512652.1-201ENST00000619006 500 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.61□□□□□ -1.67
SSSCA1O60232 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.61□□□□□ -1.67
SSSCA1O60232 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.61□□□□□ -1.67
SSSCA1O60232 FRG1EP-201ENST00000634469 770 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.61□□□□□ -1.67
SSSCA1O60232 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.61□□□□□ -1.67
SSSCA1O60232 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSSCA1O60232 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.61□□□□□ -1.67
SSSCA1O60232 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.61□□□□□ -1.67
SSSCA1O60232 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SSSCA1O60232 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSSCA1O60232 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
SSSCA1O60232 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSSCA1O60232 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.6□□□□□ -1.67
SSSCA1O60232 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.6□□□□□ -1.67
SSSCA1O60232 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SSSCA1O60232 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SSSCA1O60232 SELENOWP1-201ENST00000322792 252 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 RN7SKP77-201ENST00000363261 353 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 MIR130A-201ENST00000385274 89 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSSCA1O60232 AL139805.1-201ENST00000407837 289 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.6□□□□□ -1.67
SSSCA1O60232 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.6□□□□□ -1.67
SSSCA1O60232 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.6□□□□□ -1.67
SSSCA1O60232 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC4.6□□□□□ -1.67
SSSCA1O60232 NDUFB4P8-201ENST00000435351 367 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 AC073465.2-201ENST00000440938 498 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 BMS1P10-201ENST00000443754 1120 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.6□□□□□ -1.67
SSSCA1O60232 AL445466.1-201ENST00000448432 357 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.6□□□□□ -1.67
SSSCA1O60232 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.6□□□□□ -1.67
SSSCA1O60232 EIF3LP2-201ENST00000457262 807 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.6□□□□□ -1.67
SSSCA1O60232 SEPT10P1-201ENST00000517342 1162 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.6□□□□□ -1.67
SSSCA1O60232 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC4.6□□□□□ -1.67
SSSCA1O60232 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.6□□□□□ -1.67
SSSCA1O60232 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.6□□□□□ -1.67
SSSCA1O60232 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.6□□□□□ -1.67
SSSCA1O60232 NMNAT1P5-201ENST00000559657 841 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 AC009852.2-201ENST00000567898 485 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 SETP3-201ENST00000581726 813 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.6□□□□□ -1.67
SSSCA1O60232 MIR7853-201ENST00000584820 132 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 AC063977.7-201ENST00000594454 337 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.6□□□□□ -1.67
SSSCA1O60232 COX6CP7-201ENST00000597056 208 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 AC018809.2-201ENST00000602436 3823 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 AC073333.2-201ENST00000603589 769 ntBASIC4.6□□□□□ -1.67
SSSCA1O60232 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms