Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 SNORA21-201ENST00000362423 132 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 RNA5SP110-201ENST00000362638 115 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 RN7SKP250-201ENST00000363924 321 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 RNU6-673P-201ENST00000365084 104 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 RNU11-201ENST00000387069 134 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AL132875.1-201ENST00000403623 949 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AL035422.1-201ENST00000414193 397 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 MTND4LP21-201ENST00000415303 295 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 RPL35AP31-201ENST00000418340 337 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 THEM7P-201ENST00000419556 672 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 CUBNP2-201ENST00000443534 1139 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AC010240.2-201ENST00000445363 1205 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 ZNF619P1-201ENST00000446539 752 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 SDC4P-201ENST00000453285 601 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AC114982.2-201ENST00000461396 358 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 RN7SL836P-201ENST00000476140 296 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AC098818.1-201ENST00000478593 252 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AC108103.1-201ENST00000511286 446 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AC136777.2-201ENST00000522979 358 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 MRPS21P8-201ENST00000569196 235 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AL078601.3-201ENST00000573303 535 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 RN7SL230P-201ENST00000580835 303 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AC006115.2-201ENST00000596823 202 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AL360012.1-201ENST00000602813 131 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AL357153.4-201ENST00000620487 1016 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AC073488.6-201ENST00000632293 754 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AC099654.6-201ENST00000636487 512 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 MTND5P23-201ENST00000430812 1655 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 SMG1P7-201ENST00000565246 2704 ntBASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.2□□□□□ -1.58
RHBDD3Q9Y3P4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 OR10R3P-201ENST00000361688 942 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 RNU1-134P-201ENST00000362935 165 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 RNA5SP279-201ENST00000365513 117 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 YWHAZP6-201ENST00000399764 738 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 SNORA79B-201ENST00000410557 148 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 AL139158.1-201ENST00000424719 340 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 AC108479.1-201ENST00000431142 427 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 GAPDHP59-201ENST00000435908 267 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 SNRPFP2-201ENST00000440710 251 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 SEPT14P12-201ENST00000442280 560 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 RPSAP40-201ENST00000442343 891 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 AC009963.4-201ENST00000448535 339 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 AC002553.3-201ENST00000453002 341 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 ACA64.4-201ENST00000459070 127 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 AC113367.2-201ENST00000505749 160 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 CR383658.1-201ENST00000514609 734 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 OR56A7P-201ENST00000524865 941 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 OR4A41P-201ENST00000533053 928 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 SMIM12P1-201ENST00000603004 274 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 QTRT1P1-201ENST00000604344 1078 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 AC005828.7-201ENST00000607331 556 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 AC096861.1-201ENST00000616652 240 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 AC099654.15-201ENST00000639802 509 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms